Genome ID：GCA_035804635.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LHOCDELC_67	84623	84961	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
LHOCDELC_67	84306	84623	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
LHOCDELC_49	64888	65739	aadK	ARO:3002627	aadK	98.24	99.65	AL009126.1
LHOCDELC_16	46431	47024	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LHOCDELC_28	20862	22031	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
LHOCDELC_56	20734	22167	lmrB	ARO:3002813	lmrB	99.16	100.00	JYFL01000006.1
LHOCDELC_29	8893	11463	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LHOCDELC_5	6372	7292	mphK	ARO:3004541	mphK	98.68	100.00	CP010314.1
LHOCDELC_75	5902	7545	vmlR	ARO:3004476	vmlR	98.32	100.00	NC_000964.3
LHOCDELC_108	793	1995	blt	ARO:3003006	blt	99.25	100.00	L32599.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LHOCDELC_49	64888	65739	aadK	Streptomycin	98.48	99.65	M26879
LHOCDELC_5	6372	7292	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LHOCDELC_5	6384	7292	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.68	99.02	WP_003246254.1
LHOCDELC_49	64888	65736	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
LHOCDELC_75	5905	7545	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	96.71	99.82	WP_003234144.1
LHOCDELC_57	51220	51612	satA	streptothricin N-acetyltransferase SatA	PARTIALX	91.60	75.72	WP_003242546.1
LHOCDELC_63	1475	4072	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.48	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LHOCDELC_135	1935	3116	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LHOCDELC_53	107942	108727	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LHOCDELC_135	310	1452	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
LHOCDELC_73	49883	51646	dep/capD	0.0	Capsule	Immune modulation	98.98	100.00	NP_389723
LHOCDELC_53	104117	105055	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.94	100.00	NP_391077
LHOCDELC_33	88833	89474	hlyIII	0.0	Hemolysin III	Exotoxin	98.91	100.00	NP_390062
LHOCDELC_135	1471	1920	capC	0.0	Capsule	Immune modulation	98.89	100.00	NP_391470
LHOCDELC_53	106720	107916	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.75	100.00	NP_391079
LHOCDELC_53	96961	104097	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.56	100.00	NP_391076
LHOCDELC_53	105083	106702	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.28	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LHOCDELC_45	28043	26907	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
LHOCDELC_69	4382	5251	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LHOCDELC_41	82754	81978	CodY	1.27e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LHOCDELC_54	45179	44610	ClpP	7.58e-100	part of proteolytic complex	81.05	97.44	BAB94595
LHOCDELC_4	23297	23689	spxA1	4.11e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
LHOCDELC_4	23297	23689	spx	2.45e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LHOCDELC_10	27046	26804	SpoVG	6.48e-39	RNA-binding protein	81.48	79.41	AAT02994
LHOCDELC_52	75818	76015	CspA	3.37e-32	cold shock protein	90.91	100.00	CAA62903
LHOCDELC_33	77602	77408	CspD	7.92e-29	cold shock protein	81.54	98.48	CAC99957
LHOCDELC_12	49222	49416	CspB	7.27e-28	cold shock protein	83.08	98.48	CAD00094