Genome ID:GCA_035804665.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 9 | 16.76 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNAOPGNN_27 | 507092 | 508294 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| DNAOPGNN_27 | 333832 | 335001 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DNAOPGNN_37 | 162032 | 162349 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| DNAOPGNN_37 | 161694 | 162032 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DNAOPGNN_24 | 72022 | 72942 | mphK | ARO:3004541 | mphK | 99.67 | 100.00 | CP010314.1 |
| DNAOPGNN_24 | 58693 | 60132 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| DNAOPGNN_4 | 29104 | 30750 | vmlR | ARO:3004476 | vmlR | 97.99 | 100.18 | NC_000964.3 |
| DNAOPGNN_24 | 8992 | 9585 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| DNAOPGNN_14 | 30 | 2600 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DNAOPGNN_24 | 72022 | 72942 | mph(K) | Spiramycin, Telithromycin | 99.46 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DNAOPGNN_24 | 72025 | 72942 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.67 | 100.00 | WP_003246254.1 |
| DNAOPGNN_4 | 29104 | 30747 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 97.99 | 100.00 | WP_003234144.1 |
| DNAOPGNN_69 | 1139 | 1657 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.33 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DNAOPGNN_46 | 35955 | 36740 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| DNAOPGNN_23 | 2984 | 3433 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| DNAOPGNN_23 | 3448 | 4629 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| DNAOPGNN_27 | 132413 | 133054 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| DNAOPGNN_23 | 1823 | 2965 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| DNAOPGNN_46 | 32119 | 33057 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| DNAOPGNN_15 | 75708 | 77471 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| DNAOPGNN_46 | 24963 | 32099 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.70 | 100.00 | NP_391076 |
| DNAOPGNN_46 | 34733 | 35929 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| DNAOPGNN_46 | 33085 | 34704 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.53 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNAOPGNN_34 | 28056 | 26920 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| DNAOPGNN_40 | 4386 | 5255 | pdxS | 1.13e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DNAOPGNN_22 | 125659 | 124883 | CodY | 2.24e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DNAOPGNN_16 | 132061 | 131492 | ClpP | 1.71e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DNAOPGNN_37 | 8158 | 8550 | spxA1 | 1.34e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| DNAOPGNN_37 | 8158 | 8550 | spx | 7.97e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| DNAOPGNN_1 | 34766 | 34524 | SpoVG | 7.50e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DNAOPGNN_4 | 74537 | 74340 | CspA | 3.31e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DNAOPGNN_7 | 32008 | 31814 | CspB | 3.66e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |
| DNAOPGNN_27 | 145014 | 145208 | CspD | 4.86e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |