Genome ID:GCA_035804835.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GAMLCGEA_395007851517lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
GAMLCGEA_134190542243ykkCARO:3003063ykkC98.21100.00AL009126.1
GAMLCGEA_134158841905ykkDARO:3003064ykkD98.10100.00AL009126.1
GAMLCGEA_393727438194mphKARO:3004541mphK98.68100.00CP010314.1
GAMLCGEA_793500436650vmlRARO:3004476vmlR98.36100.18NC_000964.3
GAMLCGEA_401530216156aadKARO:3002627aadK98.24100.00AL009126.1
GAMLCGEA_9470458247bltARO:3003006blt99.25100.00L32599.1
GAMLCGEA_7210111604tmrBARO:3003059tmrB98.48100.00AL009126.3
GAMLCGEA_72052775Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GAMLCGEA_401530216156aadKStreptomycin98.71100.00M26879
GAMLCGEA_393727438194mph(K)Spiramycin, Telithromycin98.05100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GAMLCGEA_393727438182mphKmacrolide 2'-phosphotransferase MphKBLASTX98.6899.02WP_003246254.1
GAMLCGEA_793500736650vmlRABC-F type ribosomal protection protein VmlRBLASTX98.36100.00WP_003234144.1
GAMLCGEA_401530516156aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
GAMLCGEA_635109351611satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1
GAMLCGEA_157315175748rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.48100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GAMLCGEA_63505736238capB0.0CapsuleImmune modulation99.66100.00NP_391471
GAMLCGEA_2126543439dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GAMLCGEA_63343234574capA0.0CapsuleImmune modulation99.30100.00NP_391469
GAMLCGEA_152021021973dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
GAMLCGEA_2163267264dhbB0.0BacillibactinNutritional/Metabolic factor98.94100.00NP_391077
GAMLCGEA_359148192122hlyIII0.0Hemolysin IIIExotoxin98.91100.00NP_390062
GAMLCGEA_63459335042capC0.0CapsuleImmune modulation98.89100.00NP_391470
GAMLCGEA_2134654661dhbC0.0BacillibactinNutritional/Metabolic factor98.75100.00NP_391079
GAMLCGEA_21728414420dhbF0.0BacillibactinNutritional/Metabolic factor98.57100.00NP_391076
GAMLCGEA_2146796298dhbE0.0BacillibactinNutritional/Metabolic factor97.28100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GAMLCGEA_472799126855tufA0.0elongation factor Tu85.7595.69AHM69299
GAMLCGEA_691164510776pdxS1.14e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GAMLCGEA_8150249151025CodY2.29e-125nutrient-responsive regulator81.08100.00ACJ80679
GAMLCGEA_18121533122102ClpP9.44e-100part of proteolytic complex81.0597.44BAB94595
GAMLCGEA_202888528493spxA13.33e-71redox-responsive transcription factor83.97100.00AAF21893
GAMLCGEA_202888528493spx1.99e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GAMLCGEA_731129111533SpoVG6.26e-39RNA-binding protein81.4879.41AAT02994
GAMLCGEA_9820911894CspA3.12e-33cold shock protein90.91100.00CAA62903
GAMLCGEA_35103351103545CspD1.16e-28cold shock protein81.5498.48CAC99957
GAMLCGEA_641194712141CspB3.40e-28cold shock protein83.0898.48CAD00094