Genome ID：GCA_035805015.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LHNGMDCD_37	84728	85066	ykkC	ARO:3003063	ykkC	98.21	100.00	AL009126.1
LHNGMDCD_37	84411	84728	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
LHNGMDCD_1	46430	47023	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LHNGMDCD_3	35016	35936	mphK	ARO:3004541	mphK	98.68	100.00	CP010314.1
LHNGMDCD_30	28569	30212	vmlR	ARO:3004476	vmlR	98.32	100.00	NC_000964.3
LHNGMDCD_39	27325	29895	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
LHNGMDCD_29	20862	22031	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
LHNGMDCD_2	7896	8747	aadK	ARO:3002627	aadK	98.24	99.65	AL009126.1
LHNGMDCD_128	6846	8048	blt	ARO:3003006	blt	99.25	100.00	L32599.1
LHNGMDCD_10	5816	7249	lmrB	ARO:3002813	lmrB	99.16	100.00	JYFL01000006.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LHNGMDCD_2	7896	8747	aadK	Streptomycin	98.48	99.65	M26879
LHNGMDCD_3	35016	35936	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LHNGMDCD_3	35016	35924	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.68	99.02	WP_003246254.1
LHNGMDCD_2	7899	8747	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.24	100.00	WP_003229862.1
LHNGMDCD_30	28569	30209	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	96.71	99.82	WP_003234144.1
LHNGMDCD_4	22392	22784	satA	streptothricin N-acetyltransferase SatA	PARTIALX	91.60	75.72	WP_003242546.1
LHNGMDCD_80	3698	6295	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.48	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LHNGMDCD_57	1941	3122	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
LHNGMDCD_75	6516	7301	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
LHNGMDCD_57	316	1458	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
LHNGMDCD_80	57381	59144	dep/capD	0.0	Capsule	Immune modulation	98.98	100.00	NP_389723
LHNGMDCD_75	10188	11126	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	98.94	100.00	NP_391077
LHNGMDCD_38	74983	75624	hlyIII	0.0	Hemolysin III	Exotoxin	98.91	100.00	NP_390062
LHNGMDCD_57	1477	1926	capC	0.0	Capsule	Immune modulation	98.89	100.00	NP_391470
LHNGMDCD_75	7327	8523	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.75	100.00	NP_391079
LHNGMDCD_75	11146	18282	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.57	100.00	NP_391076
LHNGMDCD_75	8541	10160	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.28	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LHNGMDCD_28	28040	26904	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
LHNGMDCD_74	4389	5258	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LHNGMDCD_41	73981	74757	CodY	1.27e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LHNGMDCD_32	45213	44644	ClpP	8.76e-100	part of proteolytic complex	81.05	97.44	BAB94595
LHNGMDCD_8	41570	41178	spxA1	4.13e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
LHNGMDCD_8	41570	41178	spx	2.47e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
LHNGMDCD_7	20567	20809	SpoVG	6.47e-39	RNA-binding protein	81.48	79.41	AAT02994
LHNGMDCD_42	1924	1727	CspA	3.36e-32	cold shock protein	90.91	100.00	CAA62903
LHNGMDCD_38	86855	87049	CspD	1.01e-28	cold shock protein	81.54	98.48	CAC99957
LHNGMDCD_78	30233	30039	CspB	7.31e-28	cold shock protein	83.08	98.48	CAD00094