Genome ID:GCA_035805055.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
CJMLLOPC_57104901106340lmrBARO:3002813lmrB99.58100.42JYFL01000006.1
CJMLLOPC_422900430650vmlRARO:3004476vmlR98.18100.18NC_000964.3
CJMLLOPC_71526116112aadKARO:3002627aadK98.2499.65AL009126.1
CJMLLOPC_22934811918Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
CJMLLOPC_1964776815ykkCARO:3003063ykkC98.21100.00AL009126.1
CJMLLOPC_1961606477ykkDARO:3003064ykkD98.10100.00AL009126.1
CJMLLOPC_7611061699tmrBARO:3003059tmrB97.97100.00AL009126.3
CJMLLOPC_737331935bltARO:3003006blt99.25100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
CJMLLOPC_71526116112aadKStreptomycin98.4899.65M26879
CJMLLOPC_579208993008mph(K)Spiramycin, Telithromycin97.7299.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
CJMLLOPC_71526416112aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
CJMLLOPC_422900430647vmlRABC-F type ribosomal protection protein VmlRBLASTX98.18100.00WP_003234144.1
CJMLLOPC_253729337811satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1
CJMLLOPC_24135464138061rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.48100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
CJMLLOPC_30112271113452capB0.0CapsuleImmune modulation99.66100.00NP_391471
CJMLLOPC_143623637021dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
CJMLLOPC_30113935115077capA0.0CapsuleImmune modulation99.30100.00NP_391469
CJMLLOPC_248252384286dep/capD0.0CapsuleImmune modulation99.09100.00NP_389723
CJMLLOPC_143241133349dhbB0.0BacillibactinNutritional/Metabolic factor98.94100.00NP_391077
CJMLLOPC_30113467113916capC0.0CapsuleImmune modulation98.89100.00NP_391470
CJMLLOPC_142525532391dhbF0.0BacillibactinNutritional/Metabolic factor98.57100.00NP_391076
CJMLLOPC_143501436210dhbC0.0BacillibactinNutritional/Metabolic factor98.50100.00NP_391079
CJMLLOPC_272903329674hlyIII0.0Hemolysin IIIExotoxin97.66100.00NP_390062
CJMLLOPC_143337734996dhbE0.0BacillibactinNutritional/Metabolic factor97.28100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
CJMLLOPC_383186232998tufA0.0elongation factor Tu85.7595.69AHM69299
CJMLLOPC_2943825251pdxS1.14e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
CJMLLOPC_6116349117125CodY1.85e-125nutrient-responsive regulator81.08100.00ACJ80679
CJMLLOPC_8124819125388ClpP9.56e-100part of proteolytic complex81.0597.44BAB94595
CJMLLOPC_452885328461spxA13.32e-71redox-responsive transcription factor83.97100.00AAF21893
CJMLLOPC_452885328461spx1.98e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
CJMLLOPC_343477034528SpoVG6.22e-39RNA-binding protein81.4879.41AAT02994
CJMLLOPC_427443874241CspA3.44e-32cold shock protein90.91100.00CAA62903
CJMLLOPC_274090441098CspD7.79e-29cold shock protein81.5498.48CAC99957
CJMLLOPC_583155231358CspB7.42e-28cold shock protein83.0898.48CAD00094