Genome ID:GCA_035805095.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 9 | 18.03 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OOGKOMPC_53 | 53454 | 54374 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| OOGKOMPC_10 | 41818 | 42411 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| OOGKOMPC_62 | 28569 | 30212 | vmlR | ARO:3004476 | vmlR | 98.32 | 100.00 | NC_000964.3 |
| OOGKOMPC_33 | 27209 | 29779 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| OOGKOMPC_24 | 25642 | 25959 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| OOGKOMPC_24 | 25304 | 25642 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| OOGKOMPC_57 | 20804 | 21973 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| OOGKOMPC_85 | 9510 | 10943 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| OOGKOMPC_72 | 7705 | 8556 | aadK | ARO:3002627 | aadK | 98.24 | 99.65 | AL009126.1 |
| OOGKOMPC_4 | 733 | 1935 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OOGKOMPC_72 | 7705 | 8556 | aadK | Streptomycin | 98.48 | 99.65 | M26879 |
| OOGKOMPC_53 | 53454 | 54374 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OOGKOMPC_53 | 53454 | 54362 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| OOGKOMPC_72 | 7708 | 8556 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| OOGKOMPC_62 | 28569 | 30209 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 96.71 | 99.82 | WP_003234144.1 |
| OOGKOMPC_39 | 17344 | 17736 | satA | streptothricin N-acetyltransferase SatA | PARTIALX | 91.60 | 75.72 | WP_003242546.1 |
| OOGKOMPC_41 | 5353 | 7950 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| OOGKOMPC_9 | 809 | 1990 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| OOGKOMPC_55 | 16065 | 16850 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| OOGKOMPC_9 | 2473 | 3615 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| OOGKOMPC_41 | 59037 | 60800 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| OOGKOMPC_55 | 19737 | 20675 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 100.00 | NP_391077 |
| OOGKOMPC_3 | 74827 | 75468 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| OOGKOMPC_9 | 2005 | 2454 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| OOGKOMPC_55 | 16876 | 18072 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.75 | 100.00 | NP_391079 |
| OOGKOMPC_55 | 20695 | 27831 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.57 | 100.00 | NP_391076 |
| OOGKOMPC_55 | 18090 | 19709 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.28 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OOGKOMPC_12 | 31720 | 32856 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| OOGKOMPC_40 | 11324 | 10455 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| OOGKOMPC_1 | 82631 | 81855 | CodY | 1.27e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| OOGKOMPC_34 | 81034 | 81603 | ClpP | 7.57e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| OOGKOMPC_76 | 23354 | 23746 | spxA1 | 4.12e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| OOGKOMPC_76 | 23354 | 23746 | spx | 2.46e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| OOGKOMPC_28 | 27040 | 26798 | SpoVG | 6.47e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| OOGKOMPC_78 | 2040 | 1843 | CspA | 3.37e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| OOGKOMPC_3 | 86699 | 86893 | CspD | 1.01e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| OOGKOMPC_14 | 30005 | 29811 | CspB | 7.27e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |