Genome ID:GCA_035805215.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 9 | 17.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AAGOJPBN_6 | 207740 | 208942 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| AAGOJPBN_1 | 92731 | 95301 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| AAGOJPBN_67 | 45556 | 46995 | lmrB | ARO:3002813 | lmrB | 98.74 | 100.42 | JYFL01000006.1 |
| AAGOJPBN_6 | 34480 | 35649 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| AAGOJPBN_58 | 19105 | 19698 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| AAGOJPBN_13 | 12809 | 14455 | vmlR | ARO:3004476 | vmlR | 98.18 | 100.18 | NC_000964.3 |
| AAGOJPBN_4 | 6542 | 6880 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| AAGOJPBN_4 | 6225 | 6542 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AAGOJPBN_67 | 32745 | 33664 | mph(K) | Spiramycin, Telithromycin | 97.72 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AAGOJPBN_13 | 12812 | 14455 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.18 | 100.00 | WP_003234144.1 |
| AAGOJPBN_41 | 1159 | 1677 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.33 | 100.00 | WP_003242546.1 |
| AAGOJPBN_89 | 518 | 3115 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.94 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AAGOJPBN_3 | 155557 | 156342 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| AAGOJPBN_7 | 266935 | 267384 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| AAGOJPBN_7 | 267399 | 268580 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| AAGOJPBN_27 | 166524 | 167165 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| AAGOJPBN_7 | 265774 | 266916 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| AAGOJPBN_3 | 151721 | 152659 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| AAGOJPBN_38 | 72267 | 74030 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| AAGOJPBN_3 | 144565 | 151701 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.70 | 100.00 | NP_391076 |
| AAGOJPBN_3 | 154335 | 155531 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| AAGOJPBN_3 | 152687 | 154306 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.53 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AAGOJPBN_57 | 28153 | 27017 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| AAGOJPBN_52 | 11209 | 10340 | pdxS | 1.13e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| AAGOJPBN_53 | 29096 | 29872 | CodY | 5.90e-126 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| AAGOJPBN_7 | 114983 | 115552 | ClpP | 2.66e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| AAGOJPBN_43 | 16464 | 16856 | spxA1 | 3.19e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| AAGOJPBN_43 | 16464 | 16856 | spx | 1.90e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| AAGOJPBN_25 | 34986 | 34744 | SpoVG | 6.19e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| AAGOJPBN_83 | 9852 | 9655 | CspA | 6.47e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| AAGOJPBN_27 | 154565 | 154371 | CspD | 1.70e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| AAGOJPBN_26 | 229468 | 229662 | CspB | 2.40e-27 | cold shock protein | 83.08 | 98.48 | CAD00094 |