Genome ID:GCA_035807755.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 7 | 17.83 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HIIFEAGA_2 | 1703734 | 1704072 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| HIIFEAGA_2 | 1703417 | 1703734 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| HIIFEAGA_2 | 727801 | 728970 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| HIIFEAGA_2 | 526090 | 527292 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| HIIFEAGA_2 | 507704 | 508558 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| HIIFEAGA_6 | 107906 | 108826 | mphK | ARO:3004541 | mphK | 98.37 | 100.00 | CP010314.1 |
| HIIFEAGA_6 | 94571 | 96010 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.42 | JYFL01000006.1 |
| HIIFEAGA_6 | 44897 | 45490 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| HIIFEAGA_1 | 29194 | 30819 | vmlR | ARO:3004476 | vmlR | 98.15 | 98.90 | NC_000964.3 |
| HIIFEAGA_3 | 27407 | 29977 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HIIFEAGA_2 | 507704 | 508556 | aadK | Streptomycin | 99.30 | 99.77 | M26879 |
| HIIFEAGA_4 | 34771 | 36147 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 99.06 | 100.00 | D12567 |
| HIIFEAGA_6 | 107906 | 108826 | mph(K) | Spiramycin, Telithromycin | 98.26 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HIIFEAGA_4 | 34771 | 36144 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_063856081.1 |
| HIIFEAGA_2 | 507704 | 508555 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| HIIFEAGA_6 | 107909 | 108826 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.37 | 100.00 | WP_003246254.1 |
| HIIFEAGA_1 | 29194 | 30816 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.15 | 98.90 | WP_003234144.1 |
| HIIFEAGA_4 | 38100 | 38618 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| HIIFEAGA_2 | 1033373 | 1035970 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.29 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HIIFEAGA_2 | 927718 | 928359 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.84 | 100.00 | NP_390062 |
| HIIFEAGA_4 | 529713 | 530894 | capB | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | NP_391471 |
| HIIFEAGA_10 | 113176 | 113961 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| HIIFEAGA_4 | 530909 | 531358 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| HIIFEAGA_2 | 1080406 | 1082169 | dep/capD | 0.0 | Capsule | Immune modulation | 99.43 | 100.00 | NP_389723 |
| HIIFEAGA_10 | 109340 | 110278 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| HIIFEAGA_4 | 531377 | 532519 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| HIIFEAGA_10 | 111954 | 113150 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| HIIFEAGA_10 | 102184 | 109320 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.33 | 100.00 | NP_391076 |
| HIIFEAGA_10 | 110306 | 111925 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.04 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HIIFEAGA_5 | 28370 | 27234 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| HIIFEAGA_12 | 11307 | 10438 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HIIFEAGA_2 | 1392038 | 1391262 | CodY | 1.74e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| HIIFEAGA_4 | 693064 | 692495 | ClpP | 5.33e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| HIIFEAGA_2 | 1853897 | 1853505 | spxA1 | 1.37e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| HIIFEAGA_2 | 1853897 | 1853505 | spx | 8.15e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| HIIFEAGA_9 | 20679 | 20921 | SpoVG | 7.56e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| HIIFEAGA_1 | 84216 | 84019 | CspA | 9.98e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |