Genome ID：GCA_035809215.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
HLDNKGNC_5	671169	672338	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
HLDNKGNC_5	497851	499053	blt	ARO:3003006	blt	99.75	100.00	L32599.1
HLDNKGNC_5	478880	479734	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1
HLDNKGNC_12	338514	339434	mphK	ARO:3004541	mphK	98.37	100.00	CP010314.1
HLDNKGNC_12	325182	326621	lmrB	ARO:3002813	lmrB	99.16	100.42	JYFL01000006.1
HLDNKGNC_12	275506	276099	tmrB	ARO:3003059	tmrB	97.46	100.00	AL009126.3
HLDNKGNC_7	41673	41990	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
HLDNKGNC_7	41335	41673	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
HLDNKGNC_12	29099	30742	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
HLDNKGNC_6	27283	29853	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
HLDNKGNC_8	327146	328522	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	98.91	100.00	X08034
HLDNKGNC_5	478880	479732	aadK	Streptomycin	98.48	99.77	M26879
HLDNKGNC_12	338514	339434	mph(K)	Spiramycin, Telithromycin	97.83	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
HLDNKGNC_8	327149	328522	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_003242953.1
HLDNKGNC_12	338517	339434	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	98.37	100.00	WP_003246254.1
HLDNKGNC_12	29099	30739	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
HLDNKGNC_5	478880	479731	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
HLDNKGNC_8	324684	325202	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
HLDNKGNC_5	1019345	1021942	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.06	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
HLDNKGNC_14	246840	248021	capB	0.0	Capsule	Immune modulation	99.58	100.00	NP_391471
HLDNKGNC_14	245215	246357	capA	0.0	Capsule	Immune modulation	99.47	100.00	NP_391469
HLDNKGNC_5	913472	914113	hlyIII	0.0	Hemolysin III	Exotoxin	99.38	100.00	NP_390062
HLDNKGNC_9	113134	113919	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
HLDNKGNC_9	109298	110236	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391077
HLDNKGNC_14	246376	246825	capC	0.0	Capsule	Immune modulation	99.33	100.00	NP_391470
HLDNKGNC_9	102142	109278	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.22	100.00	NP_391076
HLDNKGNC_5	1067129	1068892	dep/capD	0.0	Capsule	Immune modulation	98.81	100.00	NP_389723
HLDNKGNC_9	111912	113108	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391079
HLDNKGNC_9	110264	111883	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.52	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
HLDNKGNC_3	28048	26912	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
HLDNKGNC_15	11189	10320	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
HLDNKGNC_7	355161	355937	CodY	5.67e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
HLDNKGNC_14	88249	88818	ClpP	2.43e-99	part of proteolytic complex	81.05	97.44	BAB94595
HLDNKGNC_11	107464	107072	spxA1	2.45e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
HLDNKGNC_11	107464	107072	spx	1.46e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
HLDNKGNC_4	20677	20919	SpoVG	7.52e-39	RNA-binding protein	81.48	79.41	AAT02994
HLDNKGNC_12	78742	78545	CspA	1.85e-31	cold shock protein	90.91	100.00	CAA62903
HLDNKGNC_11	350675	350869	CspB	3.52e-27	cold shock protein	83.08	98.48	CAD00094