Genome ID:GCA_035809395.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GABLIMEM_10427632427949ykkDARO:3003064ykkD97.14100.00AL009126.1
GABLIMEM_10427294427632ykkCARO:3003063ykkC100.00100.00AL009126.1
GABLIMEM_8156545157138tmrBARO:3003059tmrB96.95100.00AL009126.3
GABLIMEM_8105994107433lmrBARO:3002813lmrB98.95100.42JYFL01000006.1
GABLIMEM_89318094100mphKARO:3004541mphK98.37100.00CP010314.1
GABLIMEM_114869649865bmrARO:3003007bmr99.74100.00M33768.1
GABLIMEM_62900230648vmlRARO:3004476vmlR97.99100.18NC_000964.3
GABLIMEM_42721129781Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
GABLIMEM_52671327567aadKARO:3002627aadK98.24100.00AL009126.1
GABLIMEM_580249226bltARO:3003006blt99.75100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GABLIMEM_13929940675tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.56100.00D12567
GABLIMEM_52671527567aadKStreptomycin98.4899.77M26879
GABLIMEM_89318094100mph(K)Spiramycin, Telithromycin97.83100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GABLIMEM_13929940672tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.56100.00WP_063856081.1
GABLIMEM_89318094097mphKmacrolide 2'-phosphotransferase MphKBLASTX98.37100.00WP_003246254.1
GABLIMEM_52671627567aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
GABLIMEM_62900230645vmlRABC-F type ribosomal protection protein VmlRBLASTX97.99100.00WP_003234144.1
GABLIMEM_14268243200satAstreptothricin N-acetyltransferase SatABLASTX92.49100.00WP_003242546.1
GABLIMEM_12277434280031rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GABLIMEM_1518007519188capB0.0CapsuleImmune modulation99.58100.00NP_391471
GABLIMEM_1519203519652capC0.0CapsuleImmune modulation99.56100.00NP_391470
GABLIMEM_1962893963678dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GABLIMEM_1519671520813capA0.0CapsuleImmune modulation99.12100.00NP_391469
GABLIMEM_12168420169061hlyIII0.0Hemolysin IIIExotoxin99.06100.00NP_390062
GABLIMEM_1963704964900dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079
GABLIMEM_1967534974670dhbF0.0BacillibactinNutritional/Metabolic factor98.99100.00NP_391076
GABLIMEM_12325174326937dep/capD0.0CapsuleImmune modulation98.75100.00NP_389723
GABLIMEM_1964929966548dhbE0.0BacillibactinNutritional/Metabolic factor98.46100.00NP_391078
GABLIMEM_1966576967514dhbB0.0BacillibactinNutritional/Metabolic factor98.08100.00NP_391077

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GABLIMEM_72816027024tufA0.0elongation factor Tu84.9695.69AHM69299
GABLIMEM_151123110362pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
GABLIMEM_10758005758781CodY7.72e-125nutrient-responsive regulator81.08100.00ACJ80679
GABLIMEM_1665825665256ClpP6.47e-99part of proteolytic complex81.0597.44BAB94595
GABLIMEM_10276330276722spxA16.07e-70redox-responsive transcription factor83.97100.00AAF21893
GABLIMEM_10276330276722spx3.62e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GABLIMEM_143470234460SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
GABLIMEM_68141881221CspA9.46e-32cold shock protein90.91100.00CAA62903
GABLIMEM_12156455156261CspD2.06e-28cold shock protein81.5498.48CAC99957