Genome ID:GCA_035810195.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 7 | 16.43 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NDLBMBIK_4 | 575492 | 576346 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| NDLBMBIK_4 | 563700 | 564902 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| NDLBMBIK_2 | 514399 | 514737 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| NDLBMBIK_2 | 514082 | 514399 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| NDLBMBIK_1 | 414880 | 416526 | vmlR | ARO:3004476 | vmlR | 99.09 | 100.18 | NC_000964.3 |
| NDLBMBIK_4 | 384431 | 385600 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| NDLBMBIK_11 | 271215 | 273785 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| NDLBMBIK_1 | 110011 | 111444 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| NDLBMBIK_1 | 97213 | 98133 | mphK | ARO:3004541 | mphK | 99.34 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NDLBMBIK_1 | 97213 | 98133 | mph(K) | Spiramycin, Telithromycin | 99.02 | 100.00 | NC_000964 |
| NDLBMBIK_4 | 575492 | 576346 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NDLBMBIK_1 | 97213 | 98121 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.34 | 99.02 | WP_003246254.1 |
| NDLBMBIK_1 | 414883 | 416526 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.09 | 100.00 | WP_003234144.1 |
| NDLBMBIK_4 | 575495 | 576346 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| NDLBMBIK_3 | 990413 | 990931 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 94.80 | 100.00 | WP_003242546.1 |
| NDLBMBIK_4 | 55039 | 57636 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.71 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NDLBMBIK_3 | 512117 | 513298 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| NDLBMBIK_3 | 114289 | 115074 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| NDLBMBIK_3 | 110453 | 111391 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| NDLBMBIK_3 | 511653 | 512102 | capC | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | NP_391470 |
| NDLBMBIK_3 | 510492 | 511634 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| NDLBMBIK_4 | 9325 | 11088 | dep/capD | 0.0 | Capsule | Immune modulation | 99.09 | 100.00 | NP_389723 |
| NDLBMBIK_4 | 158718 | 159359 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.06 | 100.00 | NP_390062 |
| NDLBMBIK_3 | 103297 | 110433 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.84 | 100.00 | NP_391076 |
| NDLBMBIK_3 | 113067 | 114263 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.50 | 100.00 | NP_391079 |
| NDLBMBIK_3 | 111419 | 113038 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.16 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NDLBMBIK_13 | 31661 | 32797 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| NDLBMBIK_12 | 11653 | 10784 | pdxS | 1.16e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| NDLBMBIK_2 | 202822 | 202046 | CodY | 7.62e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| NDLBMBIK_3 | 366182 | 366751 | ClpP | 6.20e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| NDLBMBIK_2 | 663011 | 662619 | spxA1 | 5.99e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| NDLBMBIK_2 | 663011 | 662619 | spx | 3.57e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| NDLBMBIK_9 | 34597 | 34355 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| NDLBMBIK_1 | 360049 | 360246 | CspA | 1.86e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |