Genome ID:GCA_035812075.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DBCCGLGE_4865608865946ykkCARO:3003063ykkC100.00100.00AL009126.1
DBCCGLGE_4865291865608ykkDARO:3003064ykkD100.00100.00AL009126.1
DBCCGLGE_3678011679180bmrARO:3003007bmr99.74100.00M33768.1
DBCCGLGE_3455659456861bltARO:3003006blt100.00100.00L32599.1
DBCCGLGE_3437298438152aadKARO:3002627aadK100.00100.00AL009126.1
DBCCGLGE_5280326281246mphKARO:3004541mphK100.00100.00CP010314.1
DBCCGLGE_5266992268431lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
DBCCGLGE_5217335217928tmrBARO:3003059tmrB100.00100.00AL009126.3
DBCCGLGE_104743849081vmlRARO:3004476vmlR100.00100.00NC_000964.3
DBCCGLGE_22726829838Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DBCCGLGE_3437298438152aadKStreptomycin100.00100.00M26879
DBCCGLGE_5280326281246mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
DBCCGLGE_13641737793tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DBCCGLGE_3437298438149aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
DBCCGLGE_5280329281246mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
DBCCGLGE_13979340311satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
DBCCGLGE_13641737790tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
DBCCGLGE_104744149081vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
DBCCGLGE_4192904195498rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DBCCGLGE_1526511527653capA0.0CapsuleImmune modulation100.00100.00NP_391469
DBCCGLGE_1524847526028capB0.0CapsuleImmune modulation100.00100.00NP_391471
DBCCGLGE_1526043526492capC0.0CapsuleImmune modulation100.00100.00NP_391470
DBCCGLGE_4240393242156dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
DBCCGLGE_65877459559dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
DBCCGLGE_66245763395dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
DBCCGLGE_65958560781dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
DBCCGLGE_66081062429dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
DBCCGLGE_66341570551dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
DBCCGLGE_94828448925hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DBCCGLGE_113190333039tufA0.0elongation factor Tu84.9695.69AHM69299
DBCCGLGE_131130510436pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
DBCCGLGE_4552344551568CodY1.05e-124nutrient-responsive regulator81.08100.00ACJ80679
DBCCGLGE_1679265678696ClpP5.26e-99part of proteolytic complex81.0597.44BAB94595
DBCCGLGE_410147691014377spxA13.10e-69redox-responsive transcription factor83.21100.00AAF21893
DBCCGLGE_82096121203SpoVG7.54e-39RNA-binding protein81.4879.41AAT02994
DBCCGLGE_1019662163CspA3.38e-32cold shock protein90.91100.00CAA62903
DBCCGLGE_96088761081CspD1.02e-28cold shock protein81.5498.48CAC99957