Genome ID:GCA_035812075.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 8 | 18.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DBCCGLGE_4 | 865608 | 865946 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DBCCGLGE_4 | 865291 | 865608 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| DBCCGLGE_3 | 678011 | 679180 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DBCCGLGE_3 | 455659 | 456861 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DBCCGLGE_3 | 437298 | 438152 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| DBCCGLGE_5 | 280326 | 281246 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| DBCCGLGE_5 | 266992 | 268431 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| DBCCGLGE_5 | 217335 | 217928 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| DBCCGLGE_10 | 47438 | 49081 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DBCCGLGE_2 | 27268 | 29838 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DBCCGLGE_3 | 437298 | 438152 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DBCCGLGE_5 | 280326 | 281246 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| DBCCGLGE_1 | 36417 | 37793 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DBCCGLGE_3 | 437298 | 438149 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DBCCGLGE_5 | 280329 | 281246 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| DBCCGLGE_1 | 39793 | 40311 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| DBCCGLGE_1 | 36417 | 37790 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DBCCGLGE_10 | 47441 | 49081 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DBCCGLGE_4 | 192904 | 195498 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DBCCGLGE_1 | 526511 | 527653 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DBCCGLGE_1 | 524847 | 526028 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DBCCGLGE_1 | 526043 | 526492 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DBCCGLGE_4 | 240393 | 242156 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DBCCGLGE_6 | 58774 | 59559 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DBCCGLGE_6 | 62457 | 63395 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| DBCCGLGE_6 | 59585 | 60781 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| DBCCGLGE_6 | 60810 | 62429 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| DBCCGLGE_6 | 63415 | 70551 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| DBCCGLGE_9 | 48284 | 48925 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DBCCGLGE_11 | 31903 | 33039 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DBCCGLGE_13 | 11305 | 10436 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DBCCGLGE_4 | 552344 | 551568 | CodY | 1.05e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DBCCGLGE_1 | 679265 | 678696 | ClpP | 5.26e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DBCCGLGE_4 | 1014769 | 1014377 | spxA1 | 3.10e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| DBCCGLGE_8 | 20961 | 21203 | SpoVG | 7.54e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DBCCGLGE_10 | 1966 | 2163 | CspA | 3.38e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DBCCGLGE_9 | 60887 | 61081 | CspD | 1.02e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |