Genome ID:GCA_035812175.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 9 | 16.76 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBGOONLN_2 | 107165 | 108604 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| CBGOONLN_2 | 94350 | 95270 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| CBGOONLN_17 | 60971 | 62173 | blt | ARO:3003006 | blt | 98.00 | 100.00 | L32599.1 |
| CBGOONLN_7 | 59472 | 62042 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| CBGOONLN_17 | 44222 | 45076 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| CBGOONLN_21 | 40604 | 40942 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| CBGOONLN_21 | 40287 | 40604 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| CBGOONLN_8 | 18944 | 19537 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
| CBGOONLN_46 | 5623 | 7269 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBGOONLN_17 | 44222 | 45076 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| CBGOONLN_2 | 94350 | 95270 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBGOONLN_2 | 94350 | 95258 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| CBGOONLN_17 | 44222 | 45073 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| CBGOONLN_46 | 5626 | 7269 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| CBGOONLN_35 | 51033 | 51551 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CBGOONLN_25 | 253472 | 254653 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| CBGOONLN_27 | 112754 | 113539 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| CBGOONLN_25 | 255136 | 256278 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| CBGOONLN_27 | 101762 | 108898 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.30 | 100.00 | NP_391076 |
| CBGOONLN_47 | 1676 | 3439 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| CBGOONLN_27 | 108918 | 109856 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.04 | 100.00 | NP_391077 |
| CBGOONLN_27 | 111532 | 112728 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| CBGOONLN_13 | 143882 | 144523 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| CBGOONLN_25 | 254668 | 255117 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| CBGOONLN_27 | 109884 | 111503 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CBGOONLN_29 | 31999 | 33135 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| CBGOONLN_58 | 11735 | 10866 | pdxS | 2.01e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| CBGOONLN_15 | 151536 | 152312 | CodY | 1.99e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| CBGOONLN_14 | 45230 | 44661 | ClpP | 2.90e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| CBGOONLN_10 | 41580 | 41188 | spxA1 | 4.12e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| CBGOONLN_10 | 41580 | 41188 | spx | 2.46e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| CBGOONLN_39 | 20630 | 20872 | SpoVG | 7.53e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| CBGOONLN_4 | 40466 | 40269 | CspA | 2.35e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| CBGOONLN_13 | 132652 | 132458 | CspD | 1.09e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| CBGOONLN_1 | 32041 | 31847 | CspB | 4.10e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |