Genome ID:GCA_035812495.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
810915.65

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GKCKKNLO_12100459100776ykkDARO:3003064ykkD99.05100.00AL009126.1
GKCKKNLO_12100121100459ykkCARO:3003063ykkC100.00100.00AL009126.1
GKCKKNLO_5935911929Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
GKCKKNLO_22901110180bmrARO:3003007bmr99.49100.00M33768.1
GKCKKNLO_14611542008aadKARO:3002627aadK98.94100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GKCKKNLO_323455035926tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.35100.00X08034
GKCKKNLO_14611542006aadKStreptomycin99.0699.77M26879
GKCKKNLO_13913740056mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GKCKKNLO_323455035923tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_003242953.1
GKCKKNLO_14611542005aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.94100.00WP_003229862.1
GKCKKNLO_323790738425satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GKCKKNLO_77347174409dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
GKCKKNLO_2616012743capA0.0CapsuleImmune modulation99.65100.00NP_391469
GKCKKNLO_2632264407capB0.0CapsuleImmune modulation99.58100.00NP_391471
GKCKKNLO_2627623211capC0.0CapsuleImmune modulation99.56100.00NP_391470
GKCKKNLO_611247713118hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
GKCKKNLO_77730778092dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
GKCKKNLO_571105212815dep/capD0.0CapsuleImmune modulation99.21100.00NP_389723
GKCKKNLO_76631573451dhbF0.0BacillibactinNutritional/Metabolic factor98.78100.00NP_391076
GKCKKNLO_77608577281dhbC0.0BacillibactinNutritional/Metabolic factor98.00100.00NP_391079
GKCKKNLO_77443776056dhbE0.0BacillibactinNutritional/Metabolic factor97.84100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GKCKKNLO_829104046tufA0.0elongation factor Tu85.7595.69AHM69299
GKCKKNLO_411128410415pdxS1.96e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
GKCKKNLO_40970194CodY3.98e-126nutrient-responsive regulator81.08100.00ACJ80679
GKCKKNLO_28061280043ClpP7.85e-100part of proteolytic complex81.0597.44BAB94595
GKCKKNLO_355196852360spxA15.78e-71redox-responsive transcription factor83.97100.00AAF21893
GKCKKNLO_355196852360spx3.45e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GKCKKNLO_3179248166SpoVG5.78e-39RNA-binding protein81.4879.41AAT02994
GKCKKNLO_2059461143CspA9.23e-35cold shock protein90.91100.00CAA62903
GKCKKNLO_6112451051CspD9.16e-30cold shock protein81.5498.48CAC99957
GKCKKNLO_474756847762CspB5.37e-28cold shock protein83.0898.48CAD00094