Genome ID:GCA_035812875.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 8 | 18.25 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KINDDNBL_4 | 464283 | 465137 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| KINDDNBL_4 | 445574 | 446776 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| KINDDNBL_9 | 425544 | 425861 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| KINDDNBL_9 | 425206 | 425544 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KINDDNBL_7 | 276689 | 279259 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| KINDDNBL_4 | 223256 | 224425 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| KINDDNBL_6 | 162846 | 163439 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| KINDDNBL_6 | 112343 | 113782 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| KINDDNBL_6 | 99528 | 100448 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| KINDDNBL_13 | 29147 | 30790 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KINDDNBL_4 | 464283 | 465137 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| KINDDNBL_6 | 99528 | 100448 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| KINDDNBL_1 | 36360 | 37736 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.93 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KINDDNBL_4 | 464286 | 465137 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| KINDDNBL_6 | 99528 | 100445 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| KINDDNBL_1 | 39736 | 40254 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| KINDDNBL_13 | 29147 | 30787 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| KINDDNBL_1 | 36360 | 37733 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.78 | 100.00 | WP_003242953.1 |
| KINDDNBL_10 | 10035 | 12629 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KINDDNBL_1 | 526455 | 527597 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| KINDDNBL_1 | 524791 | 525972 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| KINDDNBL_1 | 525987 | 526436 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| KINDDNBL_10 | 57524 | 59287 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| KINDDNBL_1 | 933122 | 933907 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| KINDDNBL_1 | 936805 | 937743 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| KINDDNBL_1 | 933933 | 935129 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| KINDDNBL_1 | 935158 | 936777 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| KINDDNBL_1 | 937763 | 944899 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| KINDDNBL_4 | 23904 | 24545 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KINDDNBL_3 | 31780 | 32916 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KINDDNBL_14 | 4270 | 5139 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KINDDNBL_9 | 738808 | 739584 | CodY | 7.46e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KINDDNBL_1 | 679184 | 678615 | ClpP | 6.30e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| KINDDNBL_9 | 276383 | 276775 | spxA1 | 2.21e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| KINDDNBL_2 | 34684 | 34442 | SpoVG | 2.74e-38 | RNA-binding protein | 80.25 | 79.41 | AAT02994 |
| KINDDNBL_13 | 76262 | 76065 | CspA | 3.38e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| KINDDNBL_4 | 36507 | 36701 | CspD | 3.45e-27 | cold shock protein | 80.00 | 98.48 | CAC99957 |