Genome ID:GCA_035812975.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 9 | 18.03 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JOLGOAOA_5 | 616478 | 617647 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| JOLGOAOA_3 | 500481 | 500819 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| JOLGOAOA_3 | 500164 | 500481 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| JOLGOAOA_5 | 443194 | 444396 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| JOLGOAOA_5 | 426442 | 427296 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| JOLGOAOA_7 | 262161 | 264731 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| JOLGOAOA_10 | 190563 | 192209 | vmlR | ARO:3004476 | vmlR | 98.91 | 100.18 | NC_000964.3 |
| JOLGOAOA_4 | 109557 | 110477 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| JOLGOAOA_4 | 96228 | 97667 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.42 | JYFL01000006.1 |
| JOLGOAOA_4 | 46517 | 47110 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JOLGOAOA_4 | 109557 | 110477 | mph(K) | Spiramycin, Telithromycin | 99.13 | 100.00 | NC_000964 |
| JOLGOAOA_5 | 426442 | 427296 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JOLGOAOA_10 | 190566 | 192209 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.91 | 100.00 | WP_003234144.1 |
| JOLGOAOA_4 | 109560 | 110477 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| JOLGOAOA_5 | 426442 | 427293 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| JOLGOAOA_2 | 38299 | 38817 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.06 | 100.00 | WP_003242546.1 |
| JOLGOAOA_16 | 63166 | 65763 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.94 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JOLGOAOA_9 | 92331 | 92972 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.84 | 100.00 | NP_390062 |
| JOLGOAOA_2 | 532091 | 533272 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_391471 |
| JOLGOAOA_2 | 969733 | 970518 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| JOLGOAOA_2 | 970544 | 971740 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.33 | 100.00 | NP_391079 |
| JOLGOAOA_2 | 533755 | 534897 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| JOLGOAOA_16 | 8861 | 10624 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| JOLGOAOA_2 | 973416 | 974354 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.83 | 100.00 | NP_391077 |
| JOLGOAOA_2 | 974374 | 981510 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.71 | 100.00 | NP_391076 |
| JOLGOAOA_2 | 533287 | 533736 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| JOLGOAOA_2 | 971769 | 973388 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.67 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JOLGOAOA_8 | 31856 | 32992 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| JOLGOAOA_11 | 4284 | 5153 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| JOLGOAOA_3 | 188982 | 188206 | CodY | 6.97e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| JOLGOAOA_2 | 695314 | 694745 | ClpP | 6.51e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| JOLGOAOA_3 | 650263 | 649871 | spxA1 | 5.48e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| JOLGOAOA_3 | 650263 | 649871 | spx | 3.27e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| JOLGOAOA_1 | 20667 | 20909 | SpoVG | 7.52e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| JOLGOAOA_10 | 144174 | 144371 | CspA | 9.66e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| JOLGOAOA_9 | 104203 | 104397 | CspD | 5.37e-28 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| JOLGOAOA_12 | 32006 | 31812 | CspB | 6.31e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |