Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 2 | 6 | 7.48 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNGFGAPD_30 | 586 | 1632 | clbA | ARO:3002814 | clbA | 92.77 | 99.71 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BNGFGAPD_30 | 586 | 1629 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 88.90 | 99.33 | KR610408 |
| BNGFGAPD_81 | 358 | 1734 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 87.15 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNGFGAPD_30 | 586 | 1629 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 92.24 | 99.71 | WP_012116915.1 |
| BNGFGAPD_81 | 358 | 1728 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.43 | 99.78 | WP_003242953.1 |
| BNGFGAPD_135 | 774 | 1265 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 84.15 | 94.80 | WP_003242546.1 |
| BNGFGAPD_142 | 1 | 2133 | rphC | rifamycin-inactivating phosphotransferase RphC | PARTIAL_CONTIG_ENDX | 80.59 | 82.14 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BNGFGAPD_16 | 77589 | 78770 | capB | 0.0 | Capsule | Immune modulation | 81.79 | 99.66 | NP_391471 |
| BNGFGAPD_16 | 78785 | 79234 | capC | 3.65e-115 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BNGFGAPD_112 | 3620 | 4756 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| BNGFGAPD_50 | 1593 | 724 | pdxS | 1.59e-154 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| BNGFGAPD_53 | 25644 | 24868 | CodY | 2.22e-126 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BNGFGAPD_29 | 39080 | 38688 | spxA1 | 6.02e-71 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| BNGFGAPD_99 | 674 | 477 | CspA | 5.95e-34 | cold shock protein | 92.42 | 100.00 | CAA62903 |
| BNGFGAPD_99 | 674 | 480 | CspR | 2.95e-28 | cold shock protein | 80.00 | 98.48 | AAO82613 |
| BNGFGAPD_11 | 13773 | 13579 | CspB | 4.58e-27 | cold shock protein | 84.61 | 98.48 | CAD00094 |