Genome ID：GCA_035813935.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PKICHMDG_24	97065	98267	blt	ARO:3003006	blt	100.00	100.00	L32599.1
PKICHMDG_19	90359	91279	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
PKICHMDG_24	78704	79558	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
PKICHMDG_19	77025	78464	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
PKICHMDG_11	52520	53689	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PKICHMDG_80	47385	49028	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
PKICHMDG_19	27368	27961	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
PKICHMDG_158	2309	4879	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
PKICHMDG_217	3	314	ykkC	ARO:3003063	ykkC	100.00	91.96	AL009126.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PKICHMDG_24	78704	79558	aadK	Streptomycin	100.00	100.00	M26879
PKICHMDG_19	90359	91279	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
PKICHMDG_13	6809	8185	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PKICHMDG_24	78704	79555	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
PKICHMDG_19	90362	91279	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
PKICHMDG_13	10181	10699	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
PKICHMDG_13	6809	8182	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
PKICHMDG_80	47388	49028	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
PKICHMDG_69	3276	5870	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PKICHMDG_33	50603	51745	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
PKICHMDG_33	52228	53409	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
PKICHMDG_33	51764	52213	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
PKICHMDG_154	9550	11313	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
PKICHMDG_34	2946	3731	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
PKICHMDG_34	1724	2920	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
PKICHMDG_116	832	7968	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
PKICHMDG_12	13797	14438	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062
PKICHMDG_34	98	1695	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	98.64	NP_391078
PKICHMDG_116	53	812	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.87	80.83	NP_391077

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PKICHMDG_53	31657	32793	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PKICHMDG_74	4268	5137	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PKICHMDG_1	16451	17227	CodY	3.59e-126	nutrient-responsive regulator	81.08	100.00	ACJ80679
PKICHMDG_44	94231	93662	ClpP	7.83e-100	part of proteolytic complex	81.05	97.44	BAB94595
PKICHMDG_56	102768	103160	spxA1	3.02e-70	redox-responsive transcription factor	83.21	100.00	AAF21893
PKICHMDG_64	20667	20909	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
PKICHMDG_80	1913	2110	CspA	3.38e-32	cold shock protein	90.91	100.00	CAA62903
PKICHMDG_12	26400	26594	CspD	1.90e-29	cold shock protein	81.54	98.48	CAC99957
PKICHMDG_43	17371	17177	CspB	2.88e-28	cold shock protein	83.08	98.48	CAD00094