Genome ID:GCA_035813955.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 7 | 17.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCLPBONO_4 | 1758140 | 1758994 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| KCLPBONO_4 | 1741047 | 1742249 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| KCLPBONO_4 | 1509097 | 1510266 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| KCLPBONO_4 | 577661 | 577978 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KCLPBONO_4 | 577323 | 577661 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KCLPBONO_3 | 346285 | 347205 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| KCLPBONO_3 | 332952 | 334391 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.42 | JYFL01000006.1 |
| KCLPBONO_3 | 283322 | 283915 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| KCLPBONO_10 | 125772 | 128342 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| KCLPBONO_3 | 29036 | 30679 | vmlR | ARO:3004476 | vmlR | 99.09 | 100.00 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KCLPBONO_4 | 1758140 | 1758994 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| KCLPBONO_3 | 346285 | 347205 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KCLPBONO_3 | 29036 | 30676 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 99.09 | 100.00 | WP_003234144.1 |
| KCLPBONO_4 | 1758143 | 1758994 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| KCLPBONO_3 | 346288 | 347205 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| KCLPBONO_2 | 930492 | 931010 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 94.80 | 100.00 | WP_003242546.1 |
| KCLPBONO_4 | 1171025 | 1173622 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.41 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KCLPBONO_4 | 1296349 | 1296990 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | NP_390062 |
| KCLPBONO_2 | 433129 | 434310 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| KCLPBONO_6 | 112967 | 113752 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| KCLPBONO_6 | 111745 | 112941 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| KCLPBONO_4 | 1124006 | 1125769 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| KCLPBONO_2 | 431504 | 432646 | capA | 0.0 | Capsule | Immune modulation | 98.69 | 100.00 | NP_391469 |
| KCLPBONO_2 | 432665 | 433114 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| KCLPBONO_6 | 109131 | 110069 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.62 | 100.00 | NP_391077 |
| KCLPBONO_6 | 101975 | 109111 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.53 | 100.00 | NP_391076 |
| KCLPBONO_6 | 110097 | 111716 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.53 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCLPBONO_9 | 31659 | 32795 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KCLPBONO_13 | 4495 | 5364 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KCLPBONO_4 | 886423 | 887199 | CodY | 1.78e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KCLPBONO_2 | 267735 | 268304 | ClpP | 5.84e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| KCLPBONO_4 | 277085 | 277477 | spxA1 | 1.40e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| KCLPBONO_4 | 277085 | 277477 | spx | 8.34e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| KCLPBONO_7 | 20501 | 20743 | SpoVG | 7.48e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| KCLPBONO_3 | 74414 | 74217 | CspA | 1.91e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |