Genome ID：GCA_035814055.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	7	17.12

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
MANCPEPA_2	1637398	1637736	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
MANCPEPA_2	1637081	1637398	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
MANCPEPA_2	684990	686159	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
MANCPEPA_2	464351	465553	blt	ARO:3003006	blt	99.75	100.00	L32599.1
MANCPEPA_2	445962	446816	aadK	ARO:3002627	aadK	97.89	100.00	AL009126.1
MANCPEPA_1	389426	391069	vmlR	ARO:3004476	vmlR	98.54	100.00	NC_000964.3
MANCPEPA_4	304311	306881	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
MANCPEPA_1	147439	148032	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
MANCPEPA_1	96955	98388	lmrB	ARO:3002813	lmrB	98.95	100.00	JYFL01000006.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
MANCPEPA_7	34586	35962	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	D12567
MANCPEPA_2	445962	446814	aadK	Streptomycin	98.59	99.77	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
MANCPEPA_7	34586	35959	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_063856081.1
MANCPEPA_1	389429	391069	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.54	100.00	WP_003234144.1
MANCPEPA_2	445962	446813	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.89	100.00	WP_003229862.1
MANCPEPA_7	37942	38460	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
MANCPEPA_2	981144	983741	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.60	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
MANCPEPA_3	693938	694876	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
MANCPEPA_3	281535	282716	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
MANCPEPA_3	692291	693910	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.26	100.00	NP_391078
MANCPEPA_2	886954	887595	hlyIII	0.0	Hemolysin III	Exotoxin	99.22	100.00	NP_390062
MANCPEPA_3	690255	691040	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.11	100.00	NP_391080
MANCPEPA_3	691066	692262	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.00	100.00	NP_391079
MANCPEPA_3	694896	702032	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.00	100.00	NP_391076
MANCPEPA_3	283199	284341	capA	0.0	Capsule	Immune modulation	98.95	100.00	NP_391469
MANCPEPA_2	1028919	1030682	dep/capD	0.0	Capsule	Immune modulation	98.87	100.00	NP_389723
MANCPEPA_3	282731	283180	capC	0.0	Capsule	Immune modulation	98.67	100.00	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
MANCPEPA_5	31692	32828	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
MANCPEPA_9	11330	10461	pdxS	1.12e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
MANCPEPA_2	1327389	1326613	CodY	1.67e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
MANCPEPA_3	424135	423566	ClpP	4.83e-99	part of proteolytic complex	81.05	97.44	BAB94595
MANCPEPA_2	1788210	1787818	spxA1	1.32e-69	redox-responsive transcription factor	83.97	100.00	AAF21893
MANCPEPA_2	1788210	1787818	spx	7.85e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
MANCPEPA_8	34887	34645	SpoVG	7.52e-39	RNA-binding protein	81.48	79.41	AAT02994
MANCPEPA_1	342677	342874	CspA	1.81e-31	cold shock protein	90.91	100.00	CAA62903