Genome ID:GCA_035818935.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 32 | 46.69 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| IPMEIMAE_1 | 394 | 1233 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| IPMEIMAE_11 | 14282 | 15072 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 100.00 | 100.00 | - |
| IPMEIMAE_2 | 5123 | 5974 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| IPMEIMAE_2 | 183905 | 184666 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| IPMEIMAE_11 | 90412 | 91335 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| IPMEIMAE_11 | 89502 | 90452 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| IPMEIMAE_11 | 88395 | 89477 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| IPMEIMAE_11 | 87331 | 88305 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| IPMEIMAE_11 | 86846 | 87325 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| IPMEIMAE_11 | 85535 | 86653 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| IPMEIMAE_11 | 84008 | 84967 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827042 |
| IPMEIMAE_11 | 83245 | 83844 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| IPMEIMAE_11 | 82359 | 83108 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| IPMEIMAE_11 | 81657 | 82349 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227247 |
| IPMEIMAE_11 | 80917 | 81648 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| IPMEIMAE_11 | 79462 | 80916 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827043 |
| IPMEIMAE_2 | 219430 | 220023 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| IPMEIMAE_2 | 16707 | 18452 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| IPMEIMAE_2 | 15005 | 16705 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| IPMEIMAE_2 | 13785 | 14987 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227428 |
| IPMEIMAE_2 | 12979 | 13785 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| IPMEIMAE_2 | 12038 | 12979 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| IPMEIMAE_2 | 10893 | 12041 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| IPMEIMAE_11 | 94458 | 95516 | waaB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_157822584 |
| IPMEIMAE_10 | 74831 | 76489 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| IPMEIMAE_11 | 91343 | 92764 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| IPMEIMAE_2 | 219430 | 220023 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| IPMEIMAE_2 | 219430 | 220023 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| IPMEIMAE_2 | 15005 | 16705 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| IPMEIMAE_2 | 12979 | 13785 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| IPMEIMAE_2 | 12038 | 12979 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| IPMEIMAE_2 | 13785 | 14987 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011681436 |
| IPMEIMAE_11 | 81657 | 82349 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226047 |
| IPMEIMAE_2 | 10893 | 12041 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| IPMEIMAE_2 | 218561 | 219430 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| IPMEIMAE_11 | 80917 | 81648 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| IPMEIMAE_11 | 82359 | 83094 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| IPMEIMAE_11 | 80917 | 81648 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| IPMEIMAE_2 | 16707 | 18452 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| IPMEIMAE_11 | 82359 | 83094 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| IPMEIMAE_11 | 79462 | 80916 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_011226049 |
| IPMEIMAE_2 | 6095 | 7354 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| IPMEIMAE_11 | 79462 | 80916 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.92 | 99.79 | WP_011681177 |
| IPMEIMAE_11 | 81657 | 82349 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011681175 |
| IPMEIMAE_1 | 266011 | 267314 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| IPMEIMAE_6 | 107126 | 108136 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| IPMEIMAE_2 | 12979 | 13785 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| IPMEIMAE_9 | 6714 | 7997 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| IPMEIMAE_2 | 220452 | 221498 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| IPMEIMAE_2 | 7351 | 8049 | STER_RS07095 | 4.08e-153 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| IPMEIMAE_11 | 85023 | 85259 | STR_RS05235* | 3.54e-120 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| IPMEIMAE_2 | 8403 | 8869 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| IPMEIMAE_2 | 13785 | 14522 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IPMEIMAE_2 | 181218 | 180235 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| IPMEIMAE_8 | 14009 | 12936 | MntE | 0.0 | manganese homeostasis | 94.13 | 99.72 | ABF32167 |
| IPMEIMAE_1 | 183775 | 184743 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| IPMEIMAE_3 | 10471 | 8168 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| IPMEIMAE_2 | 94357 | 92876 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| IPMEIMAE_16 | 11322 | 9076 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| IPMEIMAE_1 | 20025 | 21017 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| IPMEIMAE_17 | 15698 | 14727 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| IPMEIMAE_3 | 124302 | 125453 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| IPMEIMAE_3 | 158775 | 160757 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| IPMEIMAE_2 | 197412 | 199142 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.69 | 100.00 | AAK34199 |
| IPMEIMAE_7 | 63225 | 61747 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| IPMEIMAE_1 | 266011 | 267312 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| IPMEIMAE_7 | 48489 | 46597 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| IPMEIMAE_16 | 6151 | 7860 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| IPMEIMAE_5 | 79960 | 78950 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| IPMEIMAE_12 | 44707 | 46068 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| IPMEIMAE_5 | 29629 | 31521 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| IPMEIMAE_1 | 251581 | 252471 | bglB | 5.01e-179 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| IPMEIMAE_10 | 13471 | 12536 | SP_0676 | 3.55e-169 | transcription facot | 81.73 | 96.89 | AAK74821 |
| IPMEIMAE_16 | 8884 | 8027 | metF | 1.17e-166 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| IPMEIMAE_11 | 42824 | 43528 | covR | 1.81e-131 | responder protein | 84.68 | 100.00 | AAK71319 |
| IPMEIMAE_2 | 128036 | 128707 | rr01 | 1.61e-126 | response regulator | 84.38 | 99.56 | CAB54566 |
| IPMEIMAE_11 | 42824 | 43528 | walR | 1.30e-121 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| IPMEIMAE_4 | 58484 | 59170 | CovR | 5.87e-119 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| IPMEIMAE_16 | 2198 | 1548 | CiaR | 1.89e-118 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| IPMEIMAE_16 | 2198 | 1548 | ciaR | 9.72e-116 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| IPMEIMAE_1 | 21314 | 21709 | SpxA2 | 6.38e-75 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| IPMEIMAE_4 | 83046 | 83333 | spr0479 | 9.40e-49 | essential gene | 86.46 | 98.97 | AAK99283 |
| IPMEIMAE_1 | 149099 | 149353 | spr1327 | 4.76e-45 | essential gene | 95.29 | 100.00 | AAL00131 |
| IPMEIMAE_7 | 14845 | 15108 | spr0175 | 4.30e-42 | pathogenitcity related | 84.09 | 100.00 | AAK98979 |
| IPMEIMAE_7 | 15672 | 15938 | spr0177 | 1.11e-33 | essential gene | 84.27 | 88.12 | AAK98981 |
| IPMEIMAE_9 | 8155 | 8655 | RopE (M5005_Spy_1611) | 3.78e-76 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| IPMEIMAE_3 | 10471 | 8174 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| IPMEIMAE_5 | 44090 | 45109 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |