Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 2 | 6 | 7.48 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMHILBAA_7 | 53780 | 54829 | clbA | ARO:3002814 | clbA | 93.12 | 100.00 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EMHILBAA_7 | 53780 | 54829 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 88.77 | 99.90 | KR610408 |
| EMHILBAA_2 | 357862 | 359238 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 87.73 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMHILBAA_7 | 53783 | 54829 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 93.12 | 100.00 | WP_012116915.1 |
| EMHILBAA_2 | 357862 | 359232 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 87.53 | 99.78 | WP_003242953.1 |
| EMHILBAA_7 | 56610 | 57128 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 84.39 | 100.00 | WP_003242546.1 |
| EMHILBAA_5 | 950022 | 952619 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.17 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EMHILBAA_3 | 474733 | 475914 | capB | 0.0 | Capsule | Immune modulation | 81.96 | 99.66 | NP_391471 |
| EMHILBAA_3 | 475929 | 476378 | capC | 3.64e-114 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EMHILBAA_8 | 27785 | 26649 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| EMHILBAA_11 | 12527 | 11658 | pdxS | 6.53e-153 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| EMHILBAA_5 | 751966 | 752742 | CodY | 8.97e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| EMHILBAA_5 | 262994 | 263386 | spxA1 | 1.42e-69 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| EMHILBAA_7 | 71309 | 71112 | CspA | 5.89e-32 | cold shock protein | 92.42 | 100.00 | CAA62903 |
| EMHILBAA_6 | 239012 | 238818 | CspD | 9.80e-28 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| EMHILBAA_6 | 239012 | 238815 | CspB | 2.03e-27 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| EMHILBAA_7 | 71309 | 71115 | CspR | 2.92e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |