Genome ID：GCA_035822575.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PDMDIDEI_2	1557243	1558100	aadK	ARO:3002627	aadK	97.18	100.35	AL009126.1
PDMDIDEI_2	1540148	1541350	blt	ARO:3003006	blt	99.00	100.00	L32599.1
PDMDIDEI_2	1343939	1345108	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PDMDIDEI_2	363907	364224	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
PDMDIDEI_2	363569	363907	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PDMDIDEI_12	124861	127431	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
PDMDIDEI_8	109248	110168	mphK	ARO:3004541	mphK	99.01	100.00	CP010314.1
PDMDIDEI_8	95914	97353	lmrB	ARO:3002813	lmrB	99.37	100.42	JYFL01000006.1
PDMDIDEI_8	46264	46857	tmrB	ARO:3003059	tmrB	98.48	100.00	AL009126.3
PDMDIDEI_3	29082	30728	vmlR	ARO:3004476	vmlR	98.18	100.18	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PDMDIDEI_8	109248	110168	mph(K)	Spiramycin, Telithromycin	99.02	100.00	NC_000964
PDMDIDEI_1	748615	749991	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.47	100.00	D12567
PDMDIDEI_2	1557249	1558100	aadK	Streptomycin	98.24	99.65	M26879

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PDMDIDEI_8	109260	110168	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.01	99.02	WP_003246254.1
PDMDIDEI_1	748618	749991	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.25	100.00	WP_063856081.1
PDMDIDEI_3	29082	30725	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.18	100.00	WP_003234144.1
PDMDIDEI_2	1557249	1558100	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.18	100.00	WP_003229862.1
PDMDIDEI_1	746123	746641	satA	streptothricin N-acetyltransferase SatA	BLASTX	93.06	100.00	WP_003242546.1
PDMDIDEI_2	1049898	1052492	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PDMDIDEI_2	1146439	1147080	hlyIII	0.0	Hemolysin III	Exotoxin	99.84	100.00	NP_390062
PDMDIDEI_1	249994	251175	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
PDMDIDEI_5	159493	160278	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
PDMDIDEI_5	160304	161500	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.17	100.00	NP_391079
PDMDIDEI_5	163176	164114	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.15	100.00	NP_391077
PDMDIDEI_1	249530	249979	capC	0.0	Capsule	Immune modulation	98.89	100.00	NP_391470
PDMDIDEI_2	1000406	1002169	dep/capD	0.0	Capsule	Immune modulation	98.81	100.00	NP_389723
PDMDIDEI_1	248369	249511	capA	0.0	Capsule	Immune modulation	98.78	100.00	NP_391469
PDMDIDEI_5	161529	163148	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	98.39	100.00	NP_391078
PDMDIDEI_5	164134	171270	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.39	100.00	NP_391076

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PDMDIDEI_7	27941	26805	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
PDMDIDEI_14	4286	5155	pdxS	1.11e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PDMDIDEI_2	674566	675342	CodY	1.63e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679
PDMDIDEI_1	94062	94631	ClpP	4.73e-99	part of proteolytic complex	81.05	97.44	BAB94595
PDMDIDEI_2	213750	214142	spx	7.63e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
PDMDIDEI_11	20630	20872	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
PDMDIDEI_3	84600	84403	CspA	1.04e-31	cold shock protein	90.91	100.00	CAA62903
PDMDIDEI_10	29389	29583	CspB	5.73e-28	cold shock protein	83.08	98.48	CAD00094