Genome ID:GCA_035822815.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 7 | 17.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFOHPLNP_5 | 515202 | 515540 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MFOHPLNP_5 | 514885 | 515202 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MFOHPLNP_3 | 466051 | 466905 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| MFOHPLNP_3 | 446878 | 448080 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| MFOHPLNP_3 | 220241 | 221410 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| MFOHPLNP_4 | 108076 | 108996 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| MFOHPLNP_4 | 94741 | 96180 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.42 | JYFL01000006.1 |
| MFOHPLNP_1 | 29011 | 30654 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| MFOHPLNP_7 | 27533 | 30103 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MFOHPLNP_6 | 994378 | 995754 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| MFOHPLNP_3 | 466053 | 466905 | aadK | Streptomycin | 98.48 | 99.77 | M26879 |
| MFOHPLNP_4 | 108076 | 108996 | mph(K) | Spiramycin, Telithromycin | 97.50 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFOHPLNP_6 | 994381 | 995754 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| MFOHPLNP_1 | 29011 | 30651 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| MFOHPLNP_4 | 108079 | 108996 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| MFOHPLNP_3 | 466054 | 466905 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| MFOHPLNP_6 | 991861 | 992379 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| MFOHPLNP_9 | 58323 | 60920 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.40 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MFOHPLNP_3 | 21054 | 21695 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| MFOHPLNP_6 | 501029 | 502210 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| MFOHPLNP_9 | 8298 | 10061 | dep/capD | 0.0 | Capsule | Immune modulation | 99.49 | 100.00 | NP_389723 |
| MFOHPLNP_6 | 86510 | 87295 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| MFOHPLNP_6 | 82674 | 83612 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| MFOHPLNP_6 | 85288 | 86484 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.17 | 100.00 | NP_391079 |
| MFOHPLNP_6 | 75520 | 82654 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.06 | 99.97 | NP_391076 |
| MFOHPLNP_6 | 499404 | 500546 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| MFOHPLNP_6 | 500565 | 501014 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| MFOHPLNP_6 | 83640 | 85259 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MFOHPLNP_13 | 11266 | 10397 | pdxS | 1.12e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MFOHPLNP_5 | 205304 | 204528 | CodY | 7.65e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MFOHPLNP_6 | 339675 | 340244 | ClpP | 6.20e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| MFOHPLNP_5 | 667493 | 667101 | spxA1 | 6.02e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| MFOHPLNP_5 | 667493 | 667101 | spx | 3.59e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| MFOHPLNP_10 | 34782 | 34540 | SpoVG | 7.54e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| MFOHPLNP_1 | 81466 | 81269 | CspA | 9.80e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MFOHPLNP_3 | 33657 | 33851 | CspD | 5.61e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |