Genome ID:GCA_036221805.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 8 | 8.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| INOCIFIG_71 | 13070 | 14221 | tufA | 0.0 | elongation factor Tu | 86.46 | 97.21 | AHM69299 |
| INOCIFIG_27 | 4469 | 5338 | pdxS | 1.12e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| INOCIFIG_57 | 26411 | 25635 | CodY | 4.31e-128 | nutrient-responsive regulator | 81.47 | 100.00 | ACJ80679 |
| INOCIFIG_57 | 26411 | 25635 | codY | 1.05e-124 | global regulator and isoleucine sensor | 80.31 | 100.00 | ASW39076 |
| INOCIFIG_69 | 8845 | 8276 | ClpP | 2.40e-104 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| INOCIFIG_47 | 6457 | 6849 | spxA1 | 1.13e-73 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| INOCIFIG_47 | 6457 | 6849 | spx | 2.44e-68 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| INOCIFIG_60 | 17785 | 18027 | SpoVG | 1.91e-39 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| INOCIFIG_125 | 570 | 373 | CspA | 7.64e-32 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| INOCIFIG_6 | 15354 | 15160 | CspD | 6.94e-30 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| INOCIFIG_6 | 15354 | 15157 | CspB | 4.67e-29 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| INOCIFIG_125 | 570 | 376 | CspR | 1.42e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |