Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 2 | 6 | 7.48 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKFPMKOK_4 | 160099 | 161145 | clbA | ARO:3002814 | clbA | 92.77 | 99.71 | CP006845.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NKFPMKOK_4 | 160099 | 161142 | cfr(B) | Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin | 88.90 | 99.33 | KR610408 |
| NKFPMKOK_8 | 186732 | 188108 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 87.15 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKFPMKOK_4 | 160099 | 161142 | clbA | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA | BLASTX | 92.24 | 99.71 | WP_012116915.1 |
| NKFPMKOK_8 | 186732 | 188102 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 86.43 | 99.78 | WP_003242953.1 |
| NKFPMKOK_4 | 157830 | 158348 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 82.66 | 100.00 | WP_003242546.1 |
| NKFPMKOK_9 | 5238 | 7835 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.06 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NKFPMKOK_1 | 497643 | 498824 | capB | 0.0 | Capsule | Immune modulation | 81.87 | 99.66 | NP_391471 |
| NKFPMKOK_1 | 497179 | 497628 | capC | 3.25e-114 | Capsule | Immune modulation | 83.59 | 99.78 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NKFPMKOK_10 | 27529 | 26393 | tufA | 0.0 | elongation factor Tu | 86.54 | 95.69 | AHM69299 |
| NKFPMKOK_22 | 12486 | 11617 | pdxS | 6.35e-153 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 84.83 | 98.31 | ACE61268 |
| NKFPMKOK_7 | 126463 | 125687 | CodY | 6.80e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| NKFPMKOK_3 | 41576 | 41184 | spxA1 | 4.31e-70 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| NKFPMKOK_4 | 143603 | 143800 | CspA | 3.19e-32 | cold shock protein | 92.42 | 100.00 | CAA62903 |
| NKFPMKOK_8 | 611658 | 611464 | CspD | 1.84e-27 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| NKFPMKOK_8 | 611658 | 611461 | CspB | 3.82e-27 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| NKFPMKOK_4 | 143603 | 143797 | CspR | 1.58e-26 | cold shock protein | 80.00 | 98.48 | AAO82613 |