Genome ID:GCA_036225645.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 8 | 8.06 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HIDJNJAD_130 | 430 | 750 | qacC | quaternary ammonium compound efflux SMR transporter QacC | EXACTX | 100.00 | 100.00 | WP_001146389.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HIDJNJAD_23 | 42365 | 41214 | tufA | 0.0 | elongation factor Tu | 86.72 | 97.21 | AHM69299 |
| HIDJNJAD_108 | 10982 | 10113 | pdxS | 1.12e-152 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HIDJNJAD_10 | 67723 | 66947 | CodY | 2.64e-128 | nutrient-responsive regulator | 81.85 | 100.00 | ACJ80679 |
| HIDJNJAD_10 | 67723 | 66947 | codY | 7.47e-125 | global regulator and isoleucine sensor | 80.69 | 100.00 | ASW39076 |
| HIDJNJAD_6 | 92652 | 92083 | ClpP | 5.61e-104 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| HIDJNJAD_52 | 11785 | 11393 | spxA1 | 4.91e-73 | redox-responsive transcription factor | 88.55 | 100.00 | AAF21893 |
| HIDJNJAD_52 | 11785 | 11393 | spx | 1.06e-67 | essential gene which is a thiol/oxidative stress sensor | 80.92 | 100.00 | BAB57159 |
| HIDJNJAD_83 | 4996 | 5238 | SpoVG | 2.38e-40 | RNA-binding protein | 82.72 | 79.41 | AAT02994 |
| HIDJNJAD_112 | 7920 | 8117 | CspA | 8.91e-32 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| HIDJNJAD_60 | 16745 | 16551 | CspD | 1.19e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| HIDJNJAD_60 | 16745 | 16548 | CspB | 8.01e-29 | cold shock protein | 80.30 | 100.00 | CAD00094 |
| HIDJNJAD_112 | 7920 | 8114 | CspR | 1.65e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |