Genome ID：GCA_036365295.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
PDPJIKIB_23	425380	425697	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
PDPJIKIB_23	425042	425380	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
PDPJIKIB_37	284728	287298	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
PDPJIKIB_1	232285	233487	blt	ARO:3003006	blt	99.25	100.00	L32599.1
PDPJIKIB_39	110582	111502	mphK	ARO:3004541	mphK	99.67	100.00	CP010314.1
PDPJIKIB_39	97252	98691	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
PDPJIKIB_1	59025	60194	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
PDPJIKIB_39	47603	48196	tmrB	ARO:3003059	tmrB	99.49	100.00	AL009126.3
PDPJIKIB_38	28915	30561	vmlR	ARO:3004476	vmlR	98.91	100.18	NC_000964.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
PDPJIKIB_39	110582	111502	mph(K)	Spiramycin, Telithromycin	99.57	100.00	NC_000964
PDPJIKIB_40	159551	160927	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.84	100.00	D12567

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
PDPJIKIB_39	110585	111502	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.67	100.00	WP_003246254.1
PDPJIKIB_40	159554	160927	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
PDPJIKIB_38	28915	30558	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.91	100.00	WP_003234144.1
PDPJIKIB_40	157065	157583	satA	streptothricin N-acetyltransferase SatA	BLASTX	93.06	100.00	WP_003242546.1
PDPJIKIB_12	506680	509268	rphC	rifamycin-inactivating phosphotransferase RphC	INTERNAL_STOP	80.25	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
PDPJIKIB_34	333005	333790	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.75	100.00	NP_391080
PDPJIKIB_41	39700	40149	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
PDPJIKIB_41	40164	41345	capB	0.0	Capsule	Immune modulation	99.49	100.00	NP_391471
PDPJIKIB_3	26064	26705	hlyIII	0.0	Hemolysin III	Exotoxin	99.38	100.00	NP_390062
PDPJIKIB_41	38539	39681	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
PDPJIKIB_34	336688	337626	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.25	100.00	NP_391077
PDPJIKIB_12	460927	462690	dep/capD	0.0	Capsule	Immune modulation	98.98	100.00	NP_389723
PDPJIKIB_34	337646	344782	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.70	100.00	NP_391076
PDPJIKIB_34	333816	335012	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391079
PDPJIKIB_34	335041	336660	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.53	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
PDPJIKIB_6	27958	26822	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
PDPJIKIB_14	4305	5174	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
PDPJIKIB_12	241577	242353	CodY	4.18e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
PDPJIKIB_34	58960	58391	ClpP	2.68e-99	part of proteolytic complex	81.05	97.44	BAB94595
PDPJIKIB_23	275598	275990	spxA1	3.12e-70	redox-responsive transcription factor	83.97	100.00	AAF21893
PDPJIKIB_23	275598	275990	spx	1.86e-68	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
PDPJIKIB_7	34740	34498	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
PDPJIKIB_38	75956	75759	CspA	9.27e-32	cold shock protein	90.91	100.00	CAA62903
PDPJIKIB_3	38665	38859	CspD	1.01e-28	cold shock protein	81.54	98.48	CAC99957
PDPJIKIB_23	30604	30410	CspB	4.50e-27	cold shock protein	83.08	98.48	CAD00094