Genome ID：GCA_036867595.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	33	41.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LKFECMPP_15	8899	9492	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
LKFECMPP_15	9492	10361	rfbA	0.0	Capsule	Immune modulation	99.89	100.00	WP_011681286
LKFECMPP_8	2185	2994	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
LKFECMPP_15	8899	9492	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
LKFECMPP_8	100	1248	STU_RS16255	0.0	Capsule	Immune modulation	99.83	100.00	WP_041828290
LKFECMPP_15	8899	9492	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
LKFECMPP_12	1014	2157	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	99.56	100.00	-
LKFECMPP_8	5271	7055	STU_RS16230	0.0	Capsule	Immune modulation	99.55	100.00	WP_011226325
LKFECMPP_6	65544	67202	fbp54	0.0	FBPs	Adherence	99.52	100.00	WP_011227179
LKFECMPP_8	4219	5274	STU_RS16235	0.0	Capsule	Immune modulation	99.43	100.00	WP_002948022
LKFECMPP_8	2994	4199	STU_RS16240	0.0	Capsule	Immune modulation	99.34	100.00	WP_011226326
LKFECMPP_3	150576	151307	STER_RS05315	0.0	Capsule	Immune modulation	99.32	100.00	WP_011681176
LKFECMPP_8	1245	2201	STU_RS16250	0.0	Capsule	Immune modulation	99.16	100.00	WP_011226328
LKFECMPP_27	1599	2561	STU_RS16260	0.0	Capsule	Immune modulation	99.06	95.25	WP_011226330
LKFECMPP_3	150576	151307	STU_RS14645	0.0	Capsule	Immune modulation	98.77	100.00	WP_011226048
LKFECMPP_10	19017	19985	cbpD	0.0	Autolysin	Exoenzyme	98.76	100.00	WP_082302295
LKFECMPP_3	150576	151307	STR_RS05260	0.0	Capsule	Immune modulation	98.63	100.00	WP_011227248
LKFECMPP_27	4936	5787	rfbD	0.0	Capsule	Immune modulation	98.47	100.00	WP_014621820
LKFECMPP_15	44262	45023	srtA	0.0	Sortase A	Exoenzyme	97.77	100.00	-
LKFECMPP_3	149115	150575	STER_RS05320	0.0	Capsule	Immune modulation	97.67	100.00	WP_011681177
LKFECMPP_27	2561	3835	STU_RS16265	0.0	Capsule	Immune modulation	97.02	100.00	WP_011226331
LKFECMPP_3	149115	150575	STU_RS14650	0.0	Capsule	Immune modulation	96.51	100.21	WP_011226049
LKFECMPP_3	152018	152758	STER_RS05305	0.0	Capsule	Immune modulation	95.82	100.00	WP_011681174
LKFECMPP_3	149115	150575	STR_RS05265	0.0	Capsule	Immune modulation	95.69	100.21	WP_041827043
LKFECMPP_3	152018	152758	STU_RS14635	0.0	Capsule	Immune modulation	95.41	100.00	WP_011226046
LKFECMPP_3	151316	152008	STU_RS14640	0.0	Capsule	Immune modulation	95.24	100.00	WP_011226047
LKFECMPP_3	152018	152753	STR_RS05250	0.0	Capsule	Immune modulation	95.11	98.13	WP_011227246
LKFECMPP_3	151316	152008	STR_RS05255	0.0	Capsule	Immune modulation	94.95	100.00	WP_011227247
LKFECMPP_3	152815	154182	STU_RS14630	0.0	Capsule	Immune modulation	94.59	99.93	WP_011226045
LKFECMPP_3	152815	154180	STER_RS05300	0.0	Capsule	Immune modulation	94.22	99.71	WP_011681173
LKFECMPP_3	151316	152008	STER_RS05310	0.0	Capsule	Immune modulation	92.50	100.00	WP_011681175
LKFECMPP_14	39130	40433	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
LKFECMPP_23	14236	15246	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	87.36	99.80	WP_002986042
LKFECMPP_2	5313	6596	tig/ropA	0.0	Trigger factor	Stress survival	80.65	99.77	WP_000107753
LKFECMPP_15	7424	8470	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
LKFECMPP_25	6468	7051	SPD_RS01775	4.87e-149	Capsule	Immune modulation	83.08	96.20	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LKFECMPP_15	47710	48693	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
LKFECMPP_7	61474	60401	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
LKFECMPP_1	126304	128607	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
LKFECMPP_12	20262	21230	spr0084	0.0	pathogenitcity related	92.57	98.48	AAK98888
LKFECMPP_5	78434	79915	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
LKFECMPP_7	40946	38700	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
LKFECMPP_16	1885	887	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
LKFECMPP_16	38002	37031	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
LKFECMPP_21	11730	9742	uvrB	0.0	excinuclease ABC, B subunit	89.44	100.00	AE014259_2
LKFECMPP_1	4871	3720	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
LKFECMPP_15	31512	29782	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.69	100.00	AAK34199
LKFECMPP_18	25684	24206	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
LKFECMPP_14	39130	40431	Eno	0.0	enolase	86.21	99.77	ABP90468
LKFECMPP_18	10949	9057	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.74	98.90	ABP91129
LKFECMPP_7	35775	37484	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
LKFECMPP_4	89783	88773	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
LKFECMPP_9	76486	77847	mnmE	0.0	central tRNA-modifying GTPase	82.02	99.56	ABP90420
LKFECMPP_4	39453	41345	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
LKFECMPP_14	24694	25584	bglB	3.90e-180	putative phospho--glucosidase	88.89	99.66	AAK33487
LKFECMPP_6	11710	10772	SP_0676	1.14e-168	transcription facot	81.15	97.20	AAK74821
LKFECMPP_7	38508	37651	metF	7.31e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
LKFECMPP_3	112306	113010	covR	3.70e-132	responder protein	85.53	100.00	AAK71319
LKFECMPP_5	50342	49671	rr01	1.47e-125	response regulator	83.93	99.56	CAB54566
LKFECMPP_3	112306	113010	walR	1.56e-122	DNA-binding response regulator	82.13	100.00	ANC99504
LKFECMPP_2	158283	158969	CovR	9.01e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
LKFECMPP_7	31821	31153	CiaR	1.14e-118	two-component response regulator	84.31	99.55	AAK74935
LKFECMPP_7	31821	31150	ciaR	1.32e-116	two component system response regulator	82.14	99.12	AIK75708
LKFECMPP_16	611	237	SpxA2	2.55e-71	transcriptional regulator	91.20	94.70	ERL21461
LKFECMPP_9	65068	64667	SpxA1	1.58e-67	transcriptional regulator	80.60	100.00	ERL19273
LKFECMPP_20	21033	20746	spr0479	2.59e-49	essential gene	86.46	98.97	AAK99283
LKFECMPP_10	61635	61889	spr1327	9.89e-46	essential gene	95.29	100.00	AAL00131
LKFECMPP_19	13842	14105	spr0175	1.38e-42	pathogenitcity related	84.09	100.00	AAK98979
LKFECMPP_19	14669	14935	spr0177	3.02e-34	essential gene	84.27	88.12	AAK98981
LKFECMPP_2	6754	7254	RopE (M5005_Spy_1611)	4.41e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
LKFECMPP_1	126304	128601	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
LKFECMPP_4	53925	54944	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451