Genome ID:GCA_036946065.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1266.40

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GEOCHMPO_3367094368143clbAARO:3002814clbA100.00100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GEOCHMPO_3367094368129cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GEOCHMPO_3367094368140clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAEXACTX100.00100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GEOCHMPO_2804385805566capB0.0CapsuleImmune modulation81.9699.66NP_391471
GEOCHMPO_2805581806030capC1.04e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GEOCHMPO_62819927063tufA0.0elongation factor Tu86.8195.69AHM69299
GEOCHMPO_81254211673pdxS1.36e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
GEOCHMPO_1821395820619CodY1.83e-124nutrient-responsive regulator81.08100.00ACJ80679
GEOCHMPO_112983771297985spxA13.34e-69redox-responsive transcription factor83.21100.00AAF21893
GEOCHMPO_3344716344913CspA2.48e-31cold shock protein90.91100.00CAA62903
GEOCHMPO_3344716344910CspR3.25e-26cold shock protein80.0098.48AAO82613
GEOCHMPO_211675571168429lipA (SAUSA300_0829)4.20e-162lipoic acid synthetase80.8295.41ABD22039