Genome ID:GCA_036966285.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 12 | 10 | 9 | 18.03 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MDENPFBE_3 | 592070 | 592924 | aadK | ARO:3002627 | aadK | 98.24 | 100.00 | AL009126.1 |
| MDENPFBE_3 | 573791 | 574990 | blt | ARO:3003006 | blt | 98.75 | 99.75 | L32599.1 |
| MDENPFBE_2 | 511779 | 512117 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| MDENPFBE_2 | 511462 | 511779 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MDENPFBE_3 | 390229 | 391398 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| MDENPFBE_5 | 139299 | 139892 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| MDENPFBE_5 | 88747 | 90186 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.42 | JYFL01000006.1 |
| MDENPFBE_5 | 75931 | 76851 | mphK | ARO:3004541 | mphK | 97.06 | 100.00 | CP010314.1 |
| MDENPFBE_6 | 27379 | 29949 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| MDENPFBE_8 | 13432 | 15075 | vmlR | ARO:3004476 | vmlR | 97.07 | 100.00 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MDENPFBE_3 | 592070 | 592924 | aadK | Streptomycin | 98.60 | 100.00 | M26879 |
| MDENPFBE_5 | 75931 | 76851 | mph(K) | Spiramycin, Telithromycin | 97.07 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MDENPFBE_3 | 592073 | 592924 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| MDENPFBE_8 | 13432 | 15072 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 97.07 | 100.00 | WP_003234144.1 |
| MDENPFBE_5 | 75931 | 76848 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.06 | 100.00 | WP_003246254.1 |
| MDENPFBE_1 | 1044082 | 1044600 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 94.80 | 100.00 | WP_003242546.1 |
| MDENPFBE_3 | 55118 | 57715 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.40 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MDENPFBE_1 | 545391 | 546572 | capB | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | NP_391471 |
| MDENPFBE_1 | 109125 | 110063 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391077 |
| MDENPFBE_3 | 8796 | 10559 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| MDENPFBE_1 | 112961 | 113746 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.11 | 100.00 | NP_391080 |
| MDENPFBE_3 | 156623 | 157264 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.06 | 100.00 | NP_390062 |
| MDENPFBE_1 | 543766 | 544908 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| MDENPFBE_1 | 544927 | 545376 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
| MDENPFBE_1 | 101969 | 109105 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.32 | 100.00 | NP_391076 |
| MDENPFBE_1 | 110091 | 111710 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.84 | 100.00 | NP_391078 |
| MDENPFBE_1 | 111739 | 112935 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.66 | 100.00 | NP_391079 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDENPFBE_11 | 31902 | 33038 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MDENPFBE_19 | 4284 | 5153 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MDENPFBE_2 | 201141 | 200365 | CodY | 7.33e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MDENPFBE_1 | 381494 | 382063 | ClpP | 6.50e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| MDENPFBE_2 | 671364 | 670972 | spxA1 | 5.03e-70 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| MDENPFBE_2 | 671364 | 670972 | spx | 3.00e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| MDENPFBE_12 | 20533 | 20775 | SpoVG | 7.49e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| MDENPFBE_8 | 70744 | 70547 | CspA | 5.55e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| MDENPFBE_14 | 31744 | 31550 | CspB | 3.39e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |
| MDENPFBE_3 | 168495 | 168689 | CspD | 3.97e-28 | cold shock protein | 81.54 | 98.48 | CAC99957 |