Genome ID:GCA_038762065.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNPFPPAG_1 | 2627484 | 2628338 | aadK | ARO:3002627 | aadK | 98.94 | 100.00 | AL009126.1 |
| FNPFPPAG_1 | 2608754 | 2609956 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| FNPFPPAG_1 | 2414940 | 2416109 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| FNPFPPAG_1 | 1344026 | 1344343 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| FNPFPPAG_1 | 1343688 | 1344026 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| FNPFPPAG_1 | 883707 | 886277 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.65 | 100.00 | AL009126.3 |
| FNPFPPAG_1 | 585722 | 587365 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| FNPFPPAG_1 | 338841 | 339434 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| FNPFPPAG_1 | 288320 | 289753 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| FNPFPPAG_1 | 275504 | 276424 | mphK | ARO:3004541 | mphK | 98.04 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNPFPPAG_1 | 2627484 | 2628338 | aadK | Streptomycin | 99.30 | 100.00 | M26879 |
| FNPFPPAG_1 | 4082850 | 4084226 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.84 | 100.00 | X08034 |
| FNPFPPAG_1 | 275504 | 276424 | mph(K) | Spiramycin, Telithromycin | 97.83 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNPFPPAG_1 | 2627487 | 2628338 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.94 | 100.00 | WP_003229862.1 |
| FNPFPPAG_1 | 4082853 | 4084226 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_003242953.1 |
| FNPFPPAG_1 | 585725 | 587365 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| FNPFPPAG_1 | 275504 | 276421 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.04 | 100.00 | WP_003246254.1 |
| FNPFPPAG_1 | 4080379 | 4080897 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| FNPFPPAG_1 | 2070328 | 2072925 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.83 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FNPFPPAG_1 | 2019871 | 2021634 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| FNPFPPAG_1 | 2190615 | 2191256 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| FNPFPPAG_1 | 3182305 | 3183501 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.50 | 100.00 | NP_391079 |
| FNPFPPAG_1 | 3590481 | 3591666 | capB | 0.0 | Capsule | Immune modulation | 99.49 | 100.25 | NP_391471 |
| FNPFPPAG_1 | 3183527 | 3184312 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| FNPFPPAG_1 | 3180657 | 3182276 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.26 | 100.00 | NP_391078 |
| FNPFPPAG_1 | 3179691 | 3180629 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| FNPFPPAG_1 | 3588856 | 3589998 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| FNPFPPAG_1 | 3590017 | 3590466 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| FNPFPPAG_1 | 3172535 | 3179671 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.08 | 100.00 | NP_391076 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNPFPPAG_1 | 126539 | 127675 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| FNPFPPAG_1 | 18664 | 19533 | pdxS | 3.05e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| FNPFPPAG_1 | 1654028 | 1654804 | CodY | 3.34e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| FNPFPPAG_1 | 3435986 | 3436555 | ClpP | 8.37e-98 | part of proteolytic complex | 80.53 | 97.44 | BAB94595 |