Genome ID：GCA_039614745.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	11	4	16.76

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CBMICMCF_1	2414130	2414984	aadK	ARO:3002627	aadK	97.54	100.00	AL009126.1
CBMICMCF_1	2395372	2396574	blt	ARO:3003006	blt	100.00	100.00	L32599.1
CBMICMCF_1	2222645	2223814	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
CBMICMCF_1	1199374	1199691	ykkD	ARO:3003064	ykkD	98.10	100.00	AL009126.1
CBMICMCF_1	1199036	1199374	ykkC	ARO:3003063	ykkC	99.11	100.00	AL009126.1
CBMICMCF_1	721644	724214	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.77	100.00	AL009126.3
CBMICMCF_1	213155	213805	Limosilactobacillus reuteri cat-TC	ARO:3002671	Lreu_cat-TC	98.54	90.76	U75299.1
CBMICMCF_1	123359	124792	lmrB	ARO:3002813	lmrB	98.95	100.00	JYFL01000006.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CBMICMCF_1	213155	213805	cat(pC194)	Chloramphenicol	99.85	100.00	NC_002013
CBMICMCF_1	3899980	3901356	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	98.77	100.00	D12567
CBMICMCF_1	2414132	2414984	aadK	Streptomycin	98.48	99.77	M26879
CBMICMCF_1	97092	98011	mph(K)	Spiramycin, Telithromycin	97.61	99.89	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CBMICMCF_1	213158	213805	catA	type A-9 chloramphenicol O-acetyltransferase	BLASTX	99.54	100.00	WP_001010387.1
CBMICMCF_1	3899983	3901356	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.69	100.00	WP_063856081.1
CBMICMCF_1	420933	422573	vmlR	ABC-F type ribosomal protection protein VmlR	INTERNAL_STOP	97.62	100.00	WP_003234144.1
CBMICMCF_1	2414133	2414984	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	97.54	100.00	WP_003229862.1
CBMICMCF_1	3897488	3898006	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CBMICMCF_1	2974062	2975000	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.68	100.00	NP_391077
CBMICMCF_1	3395590	3396771	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
CBMICMCF_1	3393965	3395107	capA	0.0	Capsule	Immune modulation	99.56	100.00	NP_391469
CBMICMCF_1	3395126	3395575	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
CBMICMCF_1	2977887	2978672	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.36	100.00	NP_391080
CBMICMCF_1	1740056	1741819	dep/capD	0.0	Capsule	Immune modulation	99.15	100.00	NP_389723
CBMICMCF_1	2966906	2974042	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	98.78	100.00	NP_391076
CBMICMCF_1	2976665	2977861	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	98.58	100.00	NP_391079
CBMICMCF_1	2019479	2020120	hlyIII	0.0	Hemolysin III	Exotoxin	97.82	100.00	NP_390062
CBMICMCF_1	2975028	2976647	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	97.78	100.00	NP_391078

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
CBMICMCF_2	1484	1776	virulence_ecoli	iss	Increased serum survival	98.98	100.00	CP001509

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CBMICMCF_1	4059046	4060182	tufA	0.0	elongation factor Tu	85.75	95.69	AHM69299
CBMICMCF_1	3945187	3946056	pdxS	5.34e-149	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.45	98.31	ACE61268
CBMICMCF_1	1525642	1526412	CodY	6.99e-122	nutrient-responsive regulator	80.16	99.23	ACJ80679
CBMICMCF_1	3240661	3241230	ClpP	2.47e-98	part of proteolytic complex	81.05	97.44	BAB94595