Genome ID:GCA_039619305.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DPAMHKFL_1 | 3704388 | 3705308 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
| DPAMHKFL_1 | 3691061 | 3692494 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| DPAMHKFL_1 | 3641374 | 3641967 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| DPAMHKFL_1 | 3371521 | 3373164 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DPAMHKFL_1 | 3056222 | 3058792 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| DPAMHKFL_1 | 2596767 | 2597105 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DPAMHKFL_1 | 2596450 | 2596767 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| DPAMHKFL_1 | 1612162 | 1613331 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DPAMHKFL_1 | 1389818 | 1391020 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DPAMHKFL_1 | 1371461 | 1372315 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DPAMHKFL_1 | 1371461 | 1372315 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DPAMHKFL_1 | 4005923 | 4007299 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 100.00 | 100.00 | X08034 |
| DPAMHKFL_1 | 3704388 | 3705308 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DPAMHKFL_1 | 1371461 | 1372312 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DPAMHKFL_1 | 4005923 | 4007296 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DPAMHKFL_1 | 3371521 | 3373161 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DPAMHKFL_1 | 3704391 | 3705308 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| DPAMHKFL_1 | 4009240 | 4009758 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
| DPAMHKFL_1 | 1919663 | 1922257 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DPAMHKFL_1 | 409019 | 410161 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DPAMHKFL_1 | 407355 | 408536 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DPAMHKFL_1 | 408551 | 409000 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DPAMHKFL_1 | 1967137 | 1968900 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DPAMHKFL_1 | 815715 | 816500 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DPAMHKFL_1 | 1812067 | 1812708 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| DPAMHKFL_1 | 819398 | 820336 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.89 | 100.00 | NP_391077 |
| DPAMHKFL_1 | 816526 | 817722 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.67 | 100.00 | NP_391079 |
| DPAMHKFL_1 | 820356 | 827492 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.58 | 100.00 | NP_391076 |
| DPAMHKFL_1 | 817751 | 819370 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.57 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DPAMHKFL_1 | 3848279 | 3847143 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DPAMHKFL_1 | 3962091 | 3961222 | pdxS | 3.03e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DPAMHKFL_1 | 2283473 | 2282697 | CodY | 3.31e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DPAMHKFL_1 | 561774 | 561205 | ClpP | 2.46e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |