Genome ID：GCA_039619405.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
4	2	3	5.39

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LEIJOGGE_1	2423475	2424521	clbA	ARO:3002814	clbA	92.77	99.71	CP006845.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LEIJOGGE_1	2423475	2424518	cfr(B)	Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin	88.90	99.33	KR610408
LEIJOGGE_1	540981	542357	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	87.15	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LEIJOGGE_1	2423475	2424518	clbA	23S rRNA (adenine(2503)-C(8))-methyltransferase ClbA	BLASTX	92.24	99.71	WP_012116915.1
LEIJOGGE_1	540987	542357	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	86.43	99.78	WP_003242953.1
LEIJOGGE_1	2421206	2421724	satA	streptothricin N-acetyltransferase SatA	BLASTX	82.66	100.00	WP_003242546.1
LEIJOGGE_1	3852428	3855025	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.06	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LEIJOGGE_1	1427135	1428316	capB	0.0	Capsule	Immune modulation	81.87	99.66	NP_391471
LEIJOGGE_1	1426671	1427120	capC	1.43e-113	Capsule	Immune modulation	83.59	99.78	NP_391470

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LEIJOGGE_1	2048337	2049473	tufA	0.0	elongation factor Tu	86.54	95.69	AHM69299
LEIJOGGE_1	1933559	1934428	pdxS	1.52e-150	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	84.83	98.31	ACE61268
LEIJOGGE_1	3542478	3543254	CodY	3.20e-124	nutrient-responsive regulator	81.08	100.00	ACJ80679