Genome ID:GCA_039620435.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDGKCHBP_1 | 2996758 | 2997678 | mphK | ARO:3004541 | mphK | 99.35 | 100.00 | CP010314.1 |
| BDGKCHBP_1 | 2983429 | 2984862 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| BDGKCHBP_1 | 2933713 | 2934306 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| BDGKCHBP_1 | 2686056 | 2687699 | vmlR | ARO:3004476 | vmlR | 98.72 | 100.00 | NC_000964.3 |
| BDGKCHBP_1 | 2326792 | 2329362 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| BDGKCHBP_1 | 1860207 | 1860545 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| BDGKCHBP_1 | 1859890 | 1860207 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| BDGKCHBP_1 | 700202 | 701371 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| BDGKCHBP_1 | 473152 | 474354 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| BDGKCHBP_1 | 447963 | 448817 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BDGKCHBP_1 | 447963 | 448815 | aadK | Streptomycin | 99.30 | 99.77 | M26879 |
| BDGKCHBP_1 | 2996758 | 2997678 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
| BDGKCHBP_1 | 3355337 | 3356713 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 98.69 | 100.00 | D12567 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDGKCHBP_1 | 2996761 | 2997678 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.35 | 100.00 | WP_003246254.1 |
| BDGKCHBP_1 | 2686056 | 2687696 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.72 | 100.00 | WP_003234144.1 |
| BDGKCHBP_1 | 3355337 | 3356710 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_063856081.1 |
| BDGKCHBP_1 | 447963 | 448814 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| BDGKCHBP_1 | 3358705 | 3359223 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 92.49 | 100.00 | WP_003242546.1 |
| BDGKCHBP_1 | 1176427 | 1179024 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BDGKCHBP_1 | 3853327 | 3854508 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| BDGKCHBP_1 | 4318187 | 4318972 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| BDGKCHBP_1 | 4321870 | 4322808 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| BDGKCHBP_1 | 937659 | 938300 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| BDGKCHBP_1 | 1223032 | 1224795 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| BDGKCHBP_1 | 4318998 | 4320194 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| BDGKCHBP_1 | 4322828 | 4329964 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.13 | 100.00 | NP_391076 |
| BDGKCHBP_1 | 3854523 | 3854972 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| BDGKCHBP_1 | 3854991 | 3856133 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| BDGKCHBP_1 | 4320223 | 4321842 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.27 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BDGKCHBP_1 | 3197773 | 3196637 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| BDGKCHBP_1 | 3311509 | 3310640 | pdxS | 3.32e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| BDGKCHBP_1 | 1550244 | 1549468 | CodY | 3.63e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BDGKCHBP_1 | 4016253 | 4015684 | ClpP | 2.69e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |