Genome ID:GCA_039621185.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFACBKAP_1 | 4307047 | 4307967 | mphK | ARO:3004541 | mphK | 99.35 | 100.00 | CP010314.1 |
| PFACBKAP_1 | 4293718 | 4295151 | lmrB | ARO:3002813 | lmrB | 99.37 | 100.00 | JYFL01000006.1 |
| PFACBKAP_1 | 4244002 | 4244595 | tmrB | ARO:3003059 | tmrB | 97.46 | 100.00 | AL009126.3 |
| PFACBKAP_1 | 3996345 | 3997988 | vmlR | ARO:3004476 | vmlR | 98.72 | 100.00 | NC_000964.3 |
| PFACBKAP_1 | 3637081 | 3639651 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| PFACBKAP_1 | 3170496 | 3170834 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| PFACBKAP_1 | 3170179 | 3170496 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| PFACBKAP_1 | 2010491 | 2011660 | bmr | ARO:3003007 | bmr | 99.23 | 100.00 | M33768.1 |
| PFACBKAP_1 | 1783441 | 1784643 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| PFACBKAP_1 | 1758252 | 1759106 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PFACBKAP_1 | 1758252 | 1759104 | aadK | Streptomycin | 99.30 | 99.77 | M26879 |
| PFACBKAP_1 | 4307047 | 4307967 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
| PFACBKAP_1 | 190398 | 191774 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.69 | 100.00 | D12567 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFACBKAP_1 | 4307050 | 4307967 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 99.35 | 100.00 | WP_003246254.1 |
| PFACBKAP_1 | 3996345 | 3997985 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.72 | 100.00 | WP_003234144.1 |
| PFACBKAP_1 | 190398 | 191771 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_063856081.1 |
| PFACBKAP_1 | 1758252 | 1759103 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| PFACBKAP_1 | 193766 | 194284 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 92.49 | 100.00 | WP_003242546.1 |
| PFACBKAP_1 | 2486716 | 2489313 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PFACBKAP_1 | 688388 | 689569 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| PFACBKAP_1 | 1153248 | 1154033 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| PFACBKAP_1 | 1156931 | 1157869 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| PFACBKAP_1 | 2247948 | 2248589 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| PFACBKAP_1 | 2533321 | 2535084 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| PFACBKAP_1 | 1154059 | 1155255 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| PFACBKAP_1 | 1157889 | 1165025 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.13 | 100.00 | NP_391076 |
| PFACBKAP_1 | 689584 | 690033 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| PFACBKAP_1 | 690052 | 691194 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| PFACBKAP_1 | 1155284 | 1156903 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.27 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PFACBKAP_1 | 32834 | 31698 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| PFACBKAP_1 | 146570 | 145701 | pdxS | 3.32e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| PFACBKAP_1 | 2860533 | 2859757 | CodY | 3.63e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| PFACBKAP_1 | 851314 | 850745 | ClpP | 2.69e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |