Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 1 | 1 | 2.45 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPAPNOCI_1 | 3778094 | 3778939 | Erm(34) | ARO:3000600 | Erm(34) | 96.80 | 100.00 | AY234334.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GPAPNOCI_1 | 3778107 | 3778939 | erm(34) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 96.04 | 98.46 | AY234334 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GPAPNOCI_1 | 3778100 | 3778939 | erm(34) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34) | BLASTX | 97.14 | 99.64 | WP_063844504.1 |
| GPAPNOCI_1 | 282258 | 283160 | blaBCL | BCL family class A beta-lactamase | BLASTX | 97.01 | 100.00 | WP_065825670.1 |
| GPAPNOCI_1 | 285577 | 286044 | aadD2 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ib | PARTIALX | 91.67 | 60.94 | WP_035202393.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| GPAPNOCI_1 | 2756933 | 2757583 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.39 | 100.00 | WP_011247375 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GPAPNOCI_1 | 187726 | 188868 | tufA | 0.0 | elongation factor Tu | 87.14 | 96.19 | AHM69299 |