Genome ID:GCA_039783195.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 34 | 29 | 44.69 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BIJHBNNN_1 | 43663 | 44502 | cbpD | 0.0 | Autolysin | Exoenzyme | 100.00 | 100.00 | WP_011226733 |
| BIJHBNNN_1 | 1313760 | 1314611 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| BIJHBNNN_1 | 1124685 | 1125446 | srtA | 0.0 | Sortase A | Exoenzyme | 100.00 | 100.00 | - |
| BIJHBNNN_1 | 967062 | 967985 | STR_RS05205 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227237 |
| BIJHBNNN_1 | 967945 | 968895 | STR_RS05210 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227238 |
| BIJHBNNN_1 | 968920 | 970002 | STR_RS05215 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227239 |
| BIJHBNNN_1 | 970092 | 971066 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227240 |
| BIJHBNNN_1 | 971072 | 971551 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827041 |
| BIJHBNNN_1 | 971744 | 972862 | STR_RS05230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_148148887 |
| BIJHBNNN_1 | 974553 | 975152 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_196767671 |
| BIJHBNNN_1 | 975289 | 976038 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227246 |
| BIJHBNNN_1 | 976749 | 977480 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227248 |
| BIJHBNNN_1 | 1089328 | 1089921 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| BIJHBNNN_1 | 1301282 | 1303027 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227426 |
| BIJHBNNN_1 | 1303029 | 1304729 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_041827077 |
| BIJHBNNN_1 | 1305949 | 1306755 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227429 |
| BIJHBNNN_1 | 1306755 | 1307696 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227430 |
| BIJHBNNN_1 | 1307693 | 1308841 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011227431 |
| BIJHBNNN_1 | 857901 | 859559 | fbp54 | 0.0 | FBPs | Adherence | 99.94 | 100.00 | WP_011227179 |
| BIJHBNNN_1 | 965633 | 967054 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_011227236 |
| BIJHBNNN_1 | 977481 | 978935 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.93 | 100.00 | WP_041827043 |
| BIJHBNNN_1 | 1304747 | 1305949 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.92 | 100.00 | WP_011227428 |
| BIJHBNNN_1 | 962881 | 963939 | waaB | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_157822584 |
| BIJHBNNN_1 | 973430 | 974389 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 99.90 | 100.00 | WP_041827042 |
| BIJHBNNN_1 | 1089328 | 1089921 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BIJHBNNN_1 | 1089328 | 1089921 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BIJHBNNN_1 | 1303029 | 1304729 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_041827753 |
| BIJHBNNN_1 | 976048 | 976740 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 99.71 | 100.00 | WP_011227247 |
| BIJHBNNN_1 | 1304747 | 1305949 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681436 |
| BIJHBNNN_1 | 1305949 | 1306755 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| BIJHBNNN_1 | 1306755 | 1307696 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.47 | 100.00 | WP_011681438 |
| BIJHBNNN_1 | 976048 | 976740 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 99.42 | 100.00 | WP_011226047 |
| BIJHBNNN_1 | 1043272 | 1044062 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 99.37 | 100.00 | - |
| BIJHBNNN_1 | 1307693 | 1308841 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.22 | 100.00 | WP_011681439 |
| BIJHBNNN_1 | 1089921 | 1090790 | rfbA | 0.0 | Capsule | Immune modulation | 99.19 | 100.00 | WP_011681286 |
| BIJHBNNN_1 | 976749 | 977480 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| BIJHBNNN_1 | 975303 | 976038 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 98.50 | 99.33 | WP_011681174 |
| BIJHBNNN_1 | 976749 | 977480 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681176 |
| BIJHBNNN_1 | 1301282 | 1303027 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011681434 |
| BIJHBNNN_1 | 977481 | 978935 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.01 | 100.00 | WP_011226049 |
| BIJHBNNN_1 | 975303 | 976038 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.96 | 99.33 | WP_011226046 |
| BIJHBNNN_1 | 1312380 | 1313639 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 97.70 | 100.00 | WP_011681445 |
| BIJHBNNN_1 | 977481 | 978935 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.99 | 99.79 | WP_011681177 |
| BIJHBNNN_1 | 976048 | 976740 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.61 | 100.00 | WP_011681175 |
| BIJHBNNN_1 | 603260 | 604563 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.02 | 99.54 | WP_000022832 |
| BIJHBNNN_1 | 1595466 | 1596476 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| BIJHBNNN_1 | 1305949 | 1306755 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 82.90 | 100.00 | WP_012000440 |
| BIJHBNNN_1 | 149037 | 150320 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| BIJHBNNN_1 | 1087853 | 1088899 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| BIJHBNNN_1 | 1311685 | 1312383 | STER_RS07095 | 2.93e-152 | Capsule | Immune modulation | 81.15 | 70.35 | WP_011681444 |
| BIJHBNNN_1 | 973138 | 973374 | STR_RS05235* | 6.61e-119 | Capsule | Immune modulation | 100.00 | 100.00 | - |
| BIJHBNNN_1 | 1310865 | 1311331 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 94.02 | 65.13 | WP_011681442 |
| BIJHBNNN_1 | 1305212 | 1305949 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 85.23 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BIJHBNNN_1 | 1128133 | 1129116 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BIJHBNNN_1 | 711796 | 712869 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BIJHBNNN_1 | 520999 | 521967 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BIJHBNNN_1 | 1475945 | 1478248 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| BIJHBNNN_1 | 1214996 | 1216477 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.11 | 100.00 | ABJ54480 |
| BIJHBNNN_1 | 732319 | 734565 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| BIJHBNNN_1 | 63294 | 64286 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| BIJHBNNN_1 | 27181 | 28152 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BIJHBNNN_1 | 1362114 | 1360963 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| BIJHBNNN_1 | 1327641 | 1325659 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| BIJHBNNN_1 | 1111939 | 1110209 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| BIJHBNNN_1 | 1785042 | 1783564 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| BIJHBNNN_1 | 603260 | 604561 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BIJHBNNN_1 | 1770306 | 1768414 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| BIJHBNNN_1 | 737490 | 735781 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| BIJHBNNN_1 | 1637160 | 1638170 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BIJHBNNN_1 | 884981 | 883620 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| BIJHBNNN_1 | 1687490 | 1685598 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| BIJHBNNN_1 | 588830 | 589720 | bglB | 2.82e-178 | putative phospho--glucosidase | 88.55 | 99.66 | AAK33487 |
| BIJHBNNN_1 | 796888 | 795953 | SP_0676 | 7.16e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| BIJHBNNN_1 | 734757 | 735614 | metF | 8.38e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| BIJHBNNN_1 | 1015573 | 1014869 | covR | 3.40e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| BIJHBNNN_1 | 1181315 | 1180644 | rr01 | 1.16e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| BIJHBNNN_1 | 1015573 | 1014869 | walR | 2.43e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| BIJHBNNN_1 | 307974 | 308660 | CovR | 9.75e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BIJHBNNN_1 | 741443 | 742093 | CiaR | 1.34e-116 | two-component response regulator | 86.17 | 96.88 | AAK74935 |
| BIJHBNNN_1 | 741443 | 742093 | ciaR | 6.91e-114 | two component system response regulator | 83.87 | 96.02 | AIK75708 |
| BIJHBNNN_1 | 64583 | 64978 | SpxA2 | 3.59e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| BIJHBNNN_1 | 896339 | 896740 | SpxA1 | 3.65e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BIJHBNNN_1 | 150478 | 150978 | RopE (M5005_Spy_1611) | 9.57e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| BIJHBNNN_1 | 1475945 | 1478242 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| BIJHBNNN_1 | 1673030 | 1672011 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |