Genome ID：GCA_039783295.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	23	26	34.71

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
NHNMMLEE_1	1142504	1143373	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
NHNMMLEE_1	1141911	1142504	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
NHNMMLEE_1	1366372	1367349	STER_RS07095	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681444
NHNMMLEE_1	1367346	1368605	STER_RS07100	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681445
NHNMMLEE_1	1141911	1142504	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
NHNMMLEE_1	1141911	1142504	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
NHNMMLEE_1	898575	900233	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
NHNMMLEE_1	1363553	1364323	STER_RS07075	0.0	Capsule	Immune modulation	99.61	99.23	WP_011681440
NHNMMLEE_1	43629	44468	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
NHNMMLEE_1	1365386	1366354	STER_RS07090	0.0	Capsule	Immune modulation	99.48	100.00	WP_011681443
NHNMMLEE_1	1364669	1365384	STER_RS07085	0.0	Capsule	Immune modulation	99.30	99.86	WP_011681442
NHNMMLEE_1	1016144	1016875	STER_RS05315	0.0	Capsule	Immune modulation	98.91	100.00	WP_011681176
NHNMMLEE_1	1016144	1016875	STU_RS14645	0.0	Capsule	Immune modulation	98.63	100.00	WP_011226048
NHNMMLEE_1	1177274	1178035	srtA	0.0	Sortase A	Exoenzyme	98.56	100.00	-
NHNMMLEE_1	1016144	1016875	STR_RS05260	0.0	Capsule	Immune modulation	98.50	100.00	WP_011227248
NHNMMLEE_1	1004717	1006132	STER_RS05250	0.0	Capsule	Immune modulation	98.38	100.00	WP_011681165
NHNMMLEE_1	1084357	1085150	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.36	100.25	-
NHNMMLEE_1	1014693	1015433	STU_RS14635	0.0	Capsule	Immune modulation	98.25	100.00	WP_011226046
NHNMMLEE_1	1015443	1016135	STR_RS05255	0.0	Capsule	Immune modulation	97.98	100.00	WP_011227247
NHNMMLEE_1	1015443	1016135	STU_RS14640	0.0	Capsule	Immune modulation	97.98	100.00	WP_011226047
NHNMMLEE_1	1016876	1018336	STER_RS05320	0.0	Capsule	Immune modulation	97.88	100.00	WP_011681177
NHNMMLEE_1	1014693	1015433	STER_RS05305	0.0	Capsule	Immune modulation	97.84	100.00	WP_011681174
NHNMMLEE_1	1014698	1015433	STR_RS05250	0.0	Capsule	Immune modulation	97.28	98.13	WP_011227246
NHNMMLEE_1	1013269	1014636	STU_RS14630	0.0	Capsule	Immune modulation	97.00	100.00	WP_011226045
NHNMMLEE_1	1016876	1018336	STU_RS14650	0.0	Capsule	Immune modulation	96.99	100.21	WP_011226049
NHNMMLEE_1	1368724	1369575	rfbD	0.0	Capsule	Immune modulation	96.83	100.00	WP_014621820
NHNMMLEE_1	1016876	1018336	STR_RS05265	0.0	Capsule	Immune modulation	96.03	100.21	WP_041827043
NHNMMLEE_1	1013271	1014636	STER_RS05300	0.0	Capsule	Immune modulation	94.58	99.85	WP_011681173
NHNMMLEE_1	1015443	1016135	STER_RS05310	0.0	Capsule	Immune modulation	90.19	100.00	WP_011681175
NHNMMLEE_1	616328	617631	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
NHNMMLEE_1	1645263	1646273	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.66	99.90	WP_002986042
NHNMMLEE_1	152706	153989	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
NHNMMLEE_1	1140436	1141482	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
NHNMMLEE_1	1002349	1002935	SPD_RS01775	1.11e-141	Capsule	Immune modulation	82.48	96.70	WP_001819836

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
NHNMMLEE_1	1180722	1181705	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
NHNMMLEE_1	726302	727375	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
NHNMMLEE_1	1535522	1537825	pfl2(Sp_0459)	0.0	formate acetyltransferase	93.10	99.22	AAK74619
NHNMMLEE_1	529224	530192	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
NHNMMLEE_1	1257441	1258922	SPD_0310	0.0	UPF0371 protein SPD_0310	92.11	100.00	ABJ54480
NHNMMLEE_1	759902	762148	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
NHNMMLEE_1	63260	64258	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
NHNMMLEE_1	27145	28116	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
NHNMMLEE_1	1418692	1417541	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
NHNMMLEE_1	1382610	1380622	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
NHNMMLEE_1	1164524	1162794	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.22	100.00	AAK34199
NHNMMLEE_1	1848303	1846825	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
NHNMMLEE_1	616328	617629	Eno	0.0	enolase	86.21	99.77	ABP90468
NHNMMLEE_1	1832117	1830225	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.74	98.90	ABP91129
NHNMMLEE_1	765073	763364	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
NHNMMLEE_1	1688245	1689255	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
NHNMMLEE_1	935431	934070	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
NHNMMLEE_1	844782	843844	SP_0676	4.61e-167	transcription facot	81.15	97.20	AAK74821
NHNMMLEE_1	762340	763197	metF	1.53e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
NHNMMLEE_1	1056582	1055878	covR	2.66e-130	responder protein	85.11	100.00	AAK71319
NHNMMLEE_1	1232836	1232165	rr01	2.96e-124	response regulator	83.93	99.56	CAB54566
NHNMMLEE_1	1056582	1055878	walR	1.58e-120	DNA-binding response regulator	81.28	100.00	ANC99504
NHNMMLEE_1	308530	309216	CovR	3.10e-118	serves to repress GAS virulence factor-encoding genes	81.22	100.00	ACE75886
NHNMMLEE_1	769028	769696	CiaR	2.03e-117	two-component response regulator	84.31	99.55	AAK74935
NHNMMLEE_1	769028	769699	ciaR	2.00e-115	two component system response regulator	82.14	99.12	AIK75708
NHNMMLEE_1	64534	64908	SpxA2	1.16e-69	transcriptional regulator	91.20	94.70	ERL21461
NHNMMLEE_1	154147	154647	RopE (M5005_Spy_1611)	4.94e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
NHNMMLEE_1	1535522	1537819	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.07	98.08	MYN69560
NHNMMLEE_1	1724106	1723087	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451