Genome ID：GCA_039783635.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	27	28	38.90

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LLCDOFAL_1	1138395	1139264	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
LLCDOFAL_1	1137802	1138395	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
LLCDOFAL_1	1353053	1354312	STER_RS07100	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681445
LLCDOFAL_1	1349255	1350031	STER_RS07075	0.0	Capsule	Immune modulation	99.87	100.00	WP_011681440
LLCDOFAL_1	1137802	1138395	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
LLCDOFAL_1	1347988	1349136	STER_RS07070	0.0	Capsule	Immune modulation	99.74	100.00	WP_011681439
LLCDOFAL_1	1137802	1138395	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
LLCDOFAL_1	1352080	1353056	STER_RS07095	0.0	Capsule	Immune modulation	99.59	99.90	WP_011681444
LLCDOFAL_1	1347050	1347991	STER_RS07065	0.0	Capsule	Immune modulation	99.58	100.00	WP_011681438
LLCDOFAL_1	43553	44392	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
LLCDOFAL_1	886040	887698	fbp54	0.0	FBPs	Adherence	99.52	100.00	WP_011227179
LLCDOFAL_1	1346244	1347050	STER_RS07060	0.0	Capsule	Immune modulation	99.50	100.00	WP_011681437
LLCDOFAL_1	1347988	1349136	STR_RS06910	0.0	Capsule	Immune modulation	99.48	100.00	WP_011227431
LLCDOFAL_1	1347050	1347991	STR_RS06905	0.0	Capsule	Immune modulation	99.47	100.00	WP_011227430
LLCDOFAL_1	1341891	1343636	STER_RS07045	0.0	Capsule	Immune modulation	99.37	100.00	WP_011681434
LLCDOFAL_1	1350377	1351092	STER_RS07085	0.0	Capsule	Immune modulation	99.30	99.86	WP_011681442
LLCDOFAL_1	1351094	1352062	STER_RS07090	0.0	Capsule	Immune modulation	99.28	100.00	WP_011681443
LLCDOFAL_1	1346244	1347050	STR_RS06900	0.0	Capsule	Immune modulation	99.26	100.00	WP_011227429
LLCDOFAL_1	1173162	1173923	srtA	0.0	Sortase A	Exoenzyme	99.08	100.00	-
LLCDOFAL_1	1003194	1003925	STER_RS05315	0.0	Capsule	Immune modulation	98.50	100.00	WP_011681176
LLCDOFAL_1	1003194	1003925	STU_RS14645	0.0	Capsule	Immune modulation	98.50	100.00	WP_011226048
LLCDOFAL_1	1080058	1080851	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.36	100.25	-
LLCDOFAL_1	1354431	1355282	rfbD	0.0	Capsule	Immune modulation	98.36	100.00	WP_014621820
LLCDOFAL_1	1003194	1003925	STR_RS05260	0.0	Capsule	Immune modulation	98.36	100.00	WP_011227248
LLCDOFAL_1	1341891	1343636	STR_RS06885	0.0	Capsule	Immune modulation	98.05	100.00	WP_011227426
LLCDOFAL_1	993188	994603	STER_RS05250	0.0	Capsule	Immune modulation	97.88	100.00	WP_011681165
LLCDOFAL_1	1001743	1002483	STER_RS05305	0.0	Capsule	Immune modulation	97.44	99.87	WP_011681174
LLCDOFAL_1	1003926	1005386	STER_RS05320	0.0	Capsule	Immune modulation	97.33	100.00	WP_011681177
LLCDOFAL_1	1001743	1002483	STU_RS14635	0.0	Capsule	Immune modulation	97.03	99.87	WP_011226046
LLCDOFAL_1	1002493	1003185	STU_RS14640	0.0	Capsule	Immune modulation	96.83	99.86	WP_011226047
LLCDOFAL_1	1001748	1002483	STR_RS05250	0.0	Capsule	Immune modulation	96.74	98.00	WP_011227246
LLCDOFAL_1	1002493	1003185	STR_RS05255	0.0	Capsule	Immune modulation	96.54	100.00	WP_011227247
LLCDOFAL_1	1003926	1005386	STU_RS14650	0.0	Capsule	Immune modulation	96.03	100.21	WP_011226049
LLCDOFAL_1	1003926	1005386	STR_RS05265	0.0	Capsule	Immune modulation	95.55	100.21	WP_041827043
LLCDOFAL_1	1000321	1001686	STER_RS05300	0.0	Capsule	Immune modulation	95.46	99.85	WP_011681173
LLCDOFAL_1	1000319	1001686	STU_RS14630	0.0	Capsule	Immune modulation	94.08	100.00	WP_011226045
LLCDOFAL_1	1002493	1003185	STER_RS05310	0.0	Capsule	Immune modulation	89.90	100.00	WP_011681175
LLCDOFAL_1	637095	638398	eno	0.0	Streptococcal enolase	Exoenzyme	88.17	99.54	WP_000022832
LLCDOFAL_1	1646181	1647191	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.66	99.90	WP_002986042
LLCDOFAL_1	1345021	1346244	SGO_RS05025	0.0	Capsule	Immune modulation	84.92	99.92	WP_012000441
LLCDOFAL_1	1346244	1347050	SGO_RS05020	0.0	Capsule	Immune modulation	83.27	100.00	WP_012000440
LLCDOFAL_1	153837	155120	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
LLCDOFAL_1	1136327	1137373	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
LLCDOFAL_1	1345507	1346244	STR_RS06895	0.0	Capsule	Immune modulation	96.61	61.35	WP_011227428
LLCDOFAL_1	1345507	1346244	STER_RS07055	0.0	Capsule	Immune modulation	96.34	61.35	WP_011681436

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LLCDOFAL_1	1176610	1177593	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.51	100.00	AAK75326
LLCDOFAL_1	741662	742735	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
LLCDOFAL_1	1530825	1533128	pfl2(Sp_0459)	0.0	formate acetyltransferase	93.10	99.22	AAK74619
LLCDOFAL_1	553413	554381	spr0084	0.0	pathogenitcity related	92.26	98.48	AAK98888
LLCDOFAL_1	1245745	1247226	SPD_0310	0.0	UPF0371 protein SPD_0310	92.11	100.00	ABJ54480
LLCDOFAL_1	763874	766120	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
LLCDOFAL_1	64404	65402	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
LLCDOFAL_1	27066	28037	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
LLCDOFAL_1	1404674	1403523	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
LLCDOFAL_1	1368456	1366468	uvrB	0.0	excinuclease ABC, B subunit	88.84	100.00	AE014259_2
LLCDOFAL_1	1160412	1158682	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.22	100.00	AAK34199
LLCDOFAL_1	1843260	1841782	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
LLCDOFAL_1	637095	638396	Eno	0.0	enolase	86.21	99.77	ABP90468
LLCDOFAL_1	1828525	1826633	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.74	98.90	ABP91129
LLCDOFAL_1	769045	767336	PGM	0.0	phosphoglucomutase	83.89	99.65	ACH87041
LLCDOFAL_1	1688137	1689147	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
LLCDOFAL_1	922914	921553	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
LLCDOFAL_1	1738452	1736560	PepO	0.0	endopeptidase	80.03	100.00	ABF32980
LLCDOFAL_1	622657	623547	bglB	1.33e-178	putative phospho--glucosidase	88.89	99.66	AAK33487
LLCDOFAL_1	832528	831593	SP_0676	7.40e-168	transcription facot	81.73	96.89	AAK74821
LLCDOFAL_1	766312	767169	metF	1.53e-164	methionine biosynthesis enzymes	86.36	99.31	AAK74739
LLCDOFAL_1	1043598	1042894	covR	2.65e-130	responder protein	85.11	100.00	AAK71319
LLCDOFAL_1	1226771	1226100	rr01	3.01e-124	response regulator	83.93	99.56	CAB54566
LLCDOFAL_1	1043598	1042894	walR	1.58e-120	DNA-binding response regulator	81.28	100.00	ANC99504
LLCDOFAL_1	772999	773667	CiaR	1.75e-120	two-component response regulator	85.65	99.55	AAK74935
LLCDOFAL_1	772999	773670	ciaR	2.09e-118	two component system response regulator	83.48	99.12	AIK75708
LLCDOFAL_1	309625	310311	CovR	3.10e-118	serves to repress GAS virulence factor-encoding genes	81.22	100.00	ACE75886
LLCDOFAL_1	65678	66052	SpxA2	1.15e-69	transcriptional regulator	91.20	94.70	ERL21461
LLCDOFAL_1	155278	155778	RopE (M5005_Spy_1611)	4.93e-75	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
LLCDOFAL_1	1530825	1533122	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.07	98.08	MYN69560
LLCDOFAL_1	1723999	1722980	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451