Genome ID:GCA_039783785.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 21 | 28 | 35.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DKHLKGED_1 | 1029233 | 1030023 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 100.00 | 100.00 | - |
| DKHLKGED_1 | 1287417 | 1288268 | rfbD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_014621820 |
| DKHLKGED_1 | 1074052 | 1074645 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| DKHLKGED_1 | 1276966 | 1278750 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226325 |
| DKHLKGED_1 | 1278747 | 1279802 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_002948022 |
| DKHLKGED_1 | 1279822 | 1281027 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226326 |
| DKHLKGED_1 | 1281027 | 1281836 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_002948020 |
| DKHLKGED_1 | 1281820 | 1282776 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226328 |
| DKHLKGED_1 | 1284030 | 1285040 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226330 |
| DKHLKGED_1 | 1285040 | 1286314 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226331 |
| DKHLKGED_1 | 1282773 | 1283921 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_041828290 |
| DKHLKGED_1 | 1109411 | 1110172 | srtA | 0.0 | Sortase A | Exoenzyme | 99.87 | 100.00 | - |
| DKHLKGED_1 | 963397 | 964851 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 99.86 | 100.00 | WP_041827043 |
| DKHLKGED_1 | 1074052 | 1074645 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| DKHLKGED_1 | 1074052 | 1074645 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| DKHLKGED_1 | 44879 | 45718 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.64 | 100.00 | WP_011226733 |
| DKHLKGED_1 | 855817 | 857475 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| DKHLKGED_1 | 1074645 | 1075514 | rfbA | 0.0 | Capsule | Immune modulation | 99.54 | 100.00 | WP_011681286 |
| DKHLKGED_1 | 963397 | 964851 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.94 | 100.00 | WP_011226049 |
| DKHLKGED_1 | 963397 | 964851 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 96.92 | 99.79 | WP_011681177 |
| DKHLKGED_1 | 602071 | 603374 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.09 | 99.54 | WP_000022832 |
| DKHLKGED_1 | 1574032 | 1575042 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.92 | 99.51 | WP_002986042 |
| DKHLKGED_1 | 1072576 | 1073622 | rfbB | 0.0 | Capsule | Immune modulation | 80.71 | 100.00 | WP_009659423 |
| DKHLKGED_1 | 150276 | 151559 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.50 | 99.77 | WP_000107753 |
| DKHLKGED_1 | 959426 | 960009 | SPD_RS01775 | 1.05e-146 | Capsule | Immune modulation | 83.08 | 96.20 | WP_001819836 |
| DKHLKGED_1 | 962932 | 963396 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 100.00 | 63.52 | WP_011227248 |
| DKHLKGED_1 | 962932 | 963396 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.50 | 63.52 | WP_011226048 |
| DKHLKGED_1 | 962932 | 963396 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 97.42 | 63.52 | WP_011681176 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DKHLKGED_1 | 1112859 | 1113842 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| DKHLKGED_1 | 709652 | 710725 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| DKHLKGED_1 | 519834 | 520802 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| DKHLKGED_1 | 1451460 | 1453763 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| DKHLKGED_1 | 730174 | 732420 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| DKHLKGED_1 | 1192289 | 1193770 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.90 | 100.00 | ABJ54480 |
| DKHLKGED_1 | 65754 | 66746 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| DKHLKGED_1 | 28396 | 29367 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| DKHLKGED_1 | 1337723 | 1336572 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.06 | 99.74 | AAL00050 |
| DKHLKGED_1 | 1303250 | 1301268 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.96 | 99.70 | AE014259_2 |
| DKHLKGED_1 | 1096665 | 1094935 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| DKHLKGED_1 | 1767776 | 1766298 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| DKHLKGED_1 | 602071 | 603372 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| DKHLKGED_1 | 1753040 | 1751148 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 85.89 | 98.90 | ABP91129 |
| DKHLKGED_1 | 735345 | 733636 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| DKHLKGED_1 | 1616973 | 1617983 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| DKHLKGED_1 | 883045 | 881684 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.02 | 99.56 | ABP90420 |
| DKHLKGED_1 | 1668990 | 1667098 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| DKHLKGED_1 | 587641 | 588531 | bglB | 1.28e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| DKHLKGED_1 | 794739 | 793804 | SP_0676 | 7.10e-168 | transcription facot | 81.73 | 96.89 | AAK74821 |
| DKHLKGED_1 | 732612 | 733469 | metF | 8.31e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| DKHLKGED_1 | 1001554 | 1000850 | covR | 3.37e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| DKHLKGED_1 | 1166018 | 1165347 | rr01 | 1.15e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| DKHLKGED_1 | 1001554 | 1000850 | walR | 2.41e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| DKHLKGED_1 | 307917 | 308603 | CovR | 9.66e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| DKHLKGED_1 | 739299 | 739967 | CiaR | 6.82e-117 | two-component response regulator | 83.86 | 99.55 | AAK74935 |
| DKHLKGED_1 | 739299 | 739970 | ciaR | 6.78e-115 | two component system response regulator | 81.70 | 99.12 | AIK75708 |
| DKHLKGED_1 | 67043 | 67438 | SpxA2 | 3.56e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| DKHLKGED_1 | 151717 | 152217 | RopE (M5005_Spy_1611) | 9.49e-75 | probable DNA-directed RNA polymerase subunit delta | 80.84 | 87.43 | AAK34603 |
| DKHLKGED_1 | 1451460 | 1453757 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| DKHLKGED_1 | 1654529 | 1653510 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.18 | 100.00 | ABJ55451 |