Genome ID:GCA_039784855.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BOCMGNAC_1 | 1308736 | 1309995 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681445 |
| BOCMGNAC_1 | 43669 | 44508 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.88 | 100.00 | WP_011226733 |
| BOCMGNAC_1 | 955058 | 955537 | STR_RS05225 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_041827041 |
| BOCMGNAC_1 | 1070945 | 1071814 | rfbA | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011681286 |
| BOCMGNAC_1 | 1306777 | 1307745 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 99.59 | 100.00 | WP_011681443 |
| BOCMGNAC_1 | 849929 | 851587 | fbp54 | 0.0 | FBPs | Adherence | 99.52 | 100.00 | WP_011227179 |
| BOCMGNAC_1 | 1070352 | 1070945 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226149 |
| BOCMGNAC_1 | 1307763 | 1308739 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 99.49 | 99.90 | WP_011681444 |
| BOCMGNAC_1 | 1070352 | 1070945 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | WP_011226149 |
| BOCMGNAC_1 | 956683 | 957282 | STR_RS05245 | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | WP_196767671 |
| BOCMGNAC_1 | 1070352 | 1070945 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.33 | 100.00 | WP_011226149 |
| BOCMGNAC_1 | 954122 | 955052 | STR_RS05220 | 0.0 | Capsule | Immune modulation | 99.25 | 95.49 | WP_011227240 |
| BOCMGNAC_1 | 948809 | 950230 | STR_RS05200 | 0.0 | Capsule | Immune modulation | 99.23 | 100.00 | WP_011227236 |
| BOCMGNAC_1 | 1105710 | 1106471 | srtA | 0.0 | Sortase A | Exoenzyme | 99.08 | 100.00 | - |
| BOCMGNAC_1 | 959618 | 961072 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 98.62 | 100.00 | WP_011226049 |
| BOCMGNAC_1 | 1025511 | 1026304 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.49 | 100.25 | - |
| BOCMGNAC_1 | 959618 | 961072 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 98.49 | 100.00 | WP_041827043 |
| BOCMGNAC_1 | 1306060 | 1306775 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 98.46 | 99.86 | WP_011681442 |
| BOCMGNAC_1 | 955559 | 956518 | STR_RS05240 | 0.0 | Capsule | Immune modulation | 98.23 | 100.00 | WP_041827042 |
| BOCMGNAC_1 | 1304944 | 1305714 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 98.18 | 99.23 | WP_011681440 |
| BOCMGNAC_1 | 958880 | 959617 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 97.83 | 100.68 | WP_011681176 |
| BOCMGNAC_1 | 957434 | 958169 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.69 | 99.33 | WP_011681174 |
| BOCMGNAC_1 | 959618 | 961072 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.60 | 99.79 | WP_011681177 |
| BOCMGNAC_1 | 957434 | 958169 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.55 | 99.33 | WP_011226046 |
| BOCMGNAC_1 | 958880 | 959617 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 97.42 | 100.68 | WP_011226048 |
| BOCMGNAC_1 | 958880 | 959617 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 97.42 | 100.55 | WP_011227248 |
| BOCMGNAC_1 | 1310114 | 1310965 | rfbD | 0.0 | Capsule | Immune modulation | 97.30 | 100.00 | WP_014621820 |
| BOCMGNAC_1 | 957420 | 958169 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 97.20 | 100.00 | WP_011227246 |
| BOCMGNAC_1 | 958179 | 958871 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 90.04 | 100.00 | WP_011681175 |
| BOCMGNAC_1 | 958179 | 958871 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011227247 |
| BOCMGNAC_1 | 958179 | 958871 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011226047 |
| BOCMGNAC_1 | 609908 | 611211 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.17 | 99.54 | WP_000022832 |
| BOCMGNAC_1 | 1588832 | 1589842 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.02 | 99.51 | WP_002986042 |
| BOCMGNAC_1 | 145244 | 146527 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| BOCMGNAC_1 | 1068876 | 1069922 | rfbB | 0.0 | Capsule | Immune modulation | 80.42 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOCMGNAC_1 | 1109158 | 1110141 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BOCMGNAC_1 | 709977 | 711050 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BOCMGNAC_1 | 527782 | 528750 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BOCMGNAC_1 | 1470215 | 1472518 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| BOCMGNAC_1 | 730499 | 732745 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| BOCMGNAC_1 | 1196434 | 1197915 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 91.70 | 100.00 | ABJ54480 |
| BOCMGNAC_1 | 63299 | 64297 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| BOCMGNAC_1 | 27185 | 28156 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BOCMGNAC_1 | 1352350 | 1351199 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| BOCMGNAC_1 | 1324354 | 1322366 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.99 | 100.00 | AE014259_2 |
| BOCMGNAC_1 | 1779867 | 1778389 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.63 | 100.00 | ADE32434 |
| BOCMGNAC_1 | 1092963 | 1091233 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.52 | 100.00 | AAK34199 |
| BOCMGNAC_1 | 609908 | 611209 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BOCMGNAC_1 | 1764671 | 1762779 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| BOCMGNAC_1 | 735671 | 733962 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| BOCMGNAC_1 | 1631807 | 1632817 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BOCMGNAC_1 | 885791 | 884439 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.12 | 98.91 | ABP90420 |
| BOCMGNAC_1 | 1682127 | 1680235 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| BOCMGNAC_1 | 595478 | 596368 | bglB | 1.29e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| BOCMGNAC_1 | 795160 | 794222 | SP_0676 | 7.94e-168 | transcription facot | 81.47 | 97.20 | AAK74821 |
| BOCMGNAC_1 | 732937 | 733794 | metF | 1.45e-164 | methionine biosynthesis enzymes | 86.01 | 99.31 | AAK74739 |
| BOCMGNAC_1 | 997849 | 997145 | covR | 3.39e-130 | responder protein | 84.68 | 100.00 | AAK71319 |
| BOCMGNAC_1 | 1168346 | 1167675 | rr01 | 4.00e-126 | response regulator | 84.82 | 99.56 | CAB54566 |
| BOCMGNAC_1 | 997849 | 997145 | walR | 2.43e-120 | DNA-binding response regulator | 80.85 | 100.00 | ANC99504 |
| BOCMGNAC_1 | 301690 | 302376 | CovR | 9.91e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BOCMGNAC_1 | 739625 | 740119 | CiaR | 2.06e-99 | two-component response regulator | 86.06 | 73.66 | AAK74935 |
| BOCMGNAC_1 | 739625 | 740122 | ciaR | 1.39e-97 | two component system response regulator | 83.13 | 73.45 | AIK75708 |
| BOCMGNAC_1 | 64573 | 64968 | SpxA2 | 3.58e-74 | transcriptional regulator | 90.91 | 100.00 | ERL21461 |
| BOCMGNAC_1 | 897157 | 897558 | SpxA1 | 3.64e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BOCMGNAC_1 | 146685 | 147185 | RopE (M5005_Spy_1611) | 4.76e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| BOCMGNAC_1 | 1470215 | 1472512 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| BOCMGNAC_1 | 1667672 | 1666653 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |