Genome ID:GCA_040270045.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
910815.65

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OPMDHAHO_895172552579aadKARO:3002627aadK98.24100.00AL009126.1
OPMDHAHO_1123916141731Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3
OPMDHAHO_1012531826757lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
OPMDHAHO_1372279223109ykkDARO:3003064ykkD99.05100.00AL009126.1
OPMDHAHO_1372245422792ykkCARO:3003063ykkC99.11100.00AL009126.1
OPMDHAHO_171951210105tmrBARO:3003059tmrB97.97100.00AL009126.3
OPMDHAHO_1518633494vmlRARO:3004476vmlR97.9799.27NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OPMDHAHO_895172552579aadKStreptomycin98.71100.00M26879
OPMDHAHO_1011250613425mph(K)Spiramycin, Telithromycin97.8399.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OPMDHAHO_895172552576aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
OPMDHAHO_1518633506vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.08100.00WP_003234144.1
OPMDHAHO_1357221472732satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OPMDHAHO_1252894230123capB0.0CapsuleImmune modulation99.66100.00NP_391471
OPMDHAHO_1253060631748capA0.0CapsuleImmune modulation99.65100.00NP_391469
OPMDHAHO_1253013830587capC0.0CapsuleImmune modulation99.56100.00NP_391470
OPMDHAHO_1003921939860hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
OPMDHAHO_1463015130936dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
OPMDHAHO_1431928421047dep/capD0.0CapsuleImmune modulation99.04100.00NP_389723
OPMDHAHO_1463382334761dhbB0.0BacillibactinNutritional/Metabolic factor98.72100.00NP_391077
OPMDHAHO_1463096232158dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
OPMDHAHO_1463478141917dhbF0.0BacillibactinNutritional/Metabolic factor98.05100.00NP_391076
OPMDHAHO_1463217633795dhbE0.0BacillibactinNutritional/Metabolic factor97.41100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OPMDHAHO_963174032876tufA0.0elongation factor Tu85.7595.69AHM69299
OPMDHAHO_15942665135pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OPMDHAHO_21897519751CodY5.86e-126nutrient-responsive regulator81.08100.00ACJ80679
OPMDHAHO_1685089451463ClpP4.38e-100part of proteolytic complex81.0597.44BAB94595
OPMDHAHO_464008740479spxA14.20e-71redox-responsive transcription factor83.97100.00AAF21893
OPMDHAHO_464008740479spx2.50e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
OPMDHAHO_1042049920741SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
OPMDHAHO_1005182452018CspD3.44e-29cold shock protein81.5498.48CAC99957
OPMDHAHO_1572917928985CspB6.83e-28cold shock protein83.0898.48CAD00094