Genome ID:GCA_040430795.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4267.48

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IANMGLIB_124866549711clbAARO:3002814clbA92.7799.71CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IANMGLIB_124866849711cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.7199.33KR610408
IANMGLIB_11372848374224tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline87.51100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IANMGLIB_124866849711clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.2499.71WP_012116915.1
IANMGLIB_11372848374218tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX87.9699.78WP_003242953.1
IANMGLIB_125146451982satAstreptothricin N-acetyltransferase SatABLASTX81.50100.00WP_003242546.1
IANMGLIB_1947067949664rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.83100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IANMGLIB_10514173515354capB0.0CapsuleImmune modulation82.2999.66NP_391471
IANMGLIB_10513709514158capC7.93e-116CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IANMGLIB_152759126455tufA0.0elongation factor Tu86.5495.69AHM69299
IANMGLIB_31238111512pdxS6.30e-153encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
IANMGLIB_1748780749556CodY8.95e-125nutrient-responsive regulator81.08100.00ACJ80679
IANMGLIB_1260430260822spxA11.41e-69redox-responsive transcription factor83.21100.00AAF21893
IANMGLIB_126960569408CspA5.89e-32cold shock protein92.42100.00CAA62903
IANMGLIB_11759244759050CspD2.26e-27cold shock protein80.0098.48CAC99957
IANMGLIB_11759244759047CspB4.68e-27cold shock protein80.30100.00CAD00094
IANMGLIB_126960569411CspR2.92e-26cold shock protein80.0098.48AAO82613