Genome ID:GCA_040712175.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MAPENAED_1 | 2597474 | 2598328 | aadK | ARO:3002627 | aadK | 97.89 | 100.00 | AL009126.1 |
| MAPENAED_1 | 2578735 | 2579937 | blt | ARO:3003006 | blt | 99.50 | 100.00 | L32599.1 |
| MAPENAED_1 | 2354353 | 2355522 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| MAPENAED_1 | 1362632 | 1362949 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| MAPENAED_1 | 1362294 | 1362632 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| MAPENAED_1 | 899175 | 901745 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| MAPENAED_1 | 603370 | 605013 | vmlR | ARO:3004476 | vmlR | 98.35 | 100.00 | NC_000964.3 |
| MAPENAED_1 | 328680 | 329273 | tmrB | ARO:3003059 | tmrB | 97.97 | 100.00 | AL009126.3 |
| MAPENAED_1 | 278151 | 279584 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
| MAPENAED_1 | 265337 | 266257 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MAPENAED_1 | 4047625 | 4049001 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.93 | 100.00 | X08034 |
| MAPENAED_1 | 265337 | 266257 | mph(K) | Spiramycin, Telithromycin | 99.02 | 100.00 | NC_000964 |
| MAPENAED_1 | 2597476 | 2598328 | aadK | Streptomycin | 98.59 | 99.77 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MAPENAED_1 | 4047628 | 4049001 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| MAPENAED_1 | 265337 | 266254 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| MAPENAED_1 | 603373 | 605013 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.35 | 100.00 | WP_003234144.1 |
| MAPENAED_1 | 2597477 | 2598328 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.89 | 100.00 | WP_003229862.1 |
| MAPENAED_1 | 4045154 | 4045672 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| MAPENAED_1 | 2047149 | 2049743 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MAPENAED_1 | 3575480 | 3576661 | capB | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | NP_391471 |
| MAPENAED_1 | 2154963 | 2155604 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.38 | 100.00 | NP_390062 |
| MAPENAED_1 | 3153567 | 3154352 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| MAPENAED_1 | 3149731 | 3150669 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391077 |
| MAPENAED_1 | 3142575 | 3149711 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391076 |
| MAPENAED_1 | 3573855 | 3574997 | capA | 0.0 | Capsule | Immune modulation | 99.21 | 100.00 | NP_391469 |
| MAPENAED_1 | 3575016 | 3575465 | capC | 0.0 | Capsule | Immune modulation | 99.11 | 100.00 | NP_391470 |
| MAPENAED_1 | 2001749 | 2003512 | dep/capD | 0.0 | Capsule | Immune modulation | 98.92 | 100.00 | NP_389723 |
| MAPENAED_1 | 3152345 | 3153541 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.66 | 100.00 | NP_391079 |
| MAPENAED_1 | 3150697 | 3152316 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.52 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MAPENAED_1 | 132330 | 133466 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| MAPENAED_1 | 18599 | 19468 | pdxS | 3.03e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| MAPENAED_1 | 1672600 | 1673376 | CodY | 3.31e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MAPENAED_1 | 3421525 | 3422094 | ClpP | 2.45e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |