Genome ID：GCA_040822615.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	29	33	43.93

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
FLPLINNB_5	88347	89216	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
FLPLINNB_5	87754	88347	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
FLPLINNB_1	156613	158358	STER_RS07045	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681434
FLPLINNB_1	160078	161280	STER_RS07055	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681436
FLPLINNB_1	161280	162086	STER_RS07060	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681437
FLPLINNB_1	162086	163027	STER_RS07065	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681438
FLPLINNB_1	164291	165067	STER_RS07075	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681440
FLPLINNB_1	165413	166129	STER_RS07085	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681442
FLPLINNB_1	166130	167098	STER_RS07090	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681443
FLPLINNB_1	167116	168093	STER_RS07095	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681444
FLPLINNB_1	168090	169349	STER_RS07100	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681445
FLPLINNB_1	158360	160060	STER_RS07050	0.0	Capsule	Immune modulation	99.94	100.00	WP_041827753
FLPLINNB_1	163024	164172	STER_RS07070	0.0	Capsule	Immune modulation	99.91	100.00	WP_011681439
FLPLINNB_5	87754	88347	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
FLPLINNB_1	158360	160060	STR_RS06890	0.0	Capsule	Immune modulation	99.77	100.00	WP_041827077
FLPLINNB_10	11421	12113	STU_RS14640	0.0	Capsule	Immune modulation	99.71	100.00	WP_011226047
FLPLINNB_5	87754	88347	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
FLPLINNB_4	12996	14654	fbp54	0.0	FBPs	Adherence	99.64	100.00	WP_011227179
FLPLINNB_20	646	1485	cbpD	0.0	Autolysin	Exoenzyme	99.52	100.00	WP_011226733
FLPLINNB_1	161280	162086	STR_RS06900	0.0	Capsule	Immune modulation	99.50	100.00	WP_011227429
FLPLINNB_1	162086	163027	STR_RS06905	0.0	Capsule	Immune modulation	99.47	100.00	WP_011227430
FLPLINNB_1	160078	161280	STR_RS06895	0.0	Capsule	Immune modulation	99.42	100.00	WP_011227428
FLPLINNB_1	163024	164172	STR_RS06910	0.0	Capsule	Immune modulation	99.30	100.00	WP_011227431
FLPLINNB_10	12854	14314	STER_RS05320	0.0	Capsule	Immune modulation	99.25	100.00	WP_011681177
FLPLINNB_10	11421	12113	STR_RS05255	0.0	Capsule	Immune modulation	99.13	100.00	WP_011227247
FLPLINNB_10	7564	8013	STU_RS14620	0.0	Capsule	Immune modulation	99.11	100.00	WP_011226042
FLPLINNB_5	32851	33641	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.61	100.00	-
FLPLINNB_1	156613	158358	STR_RS06885	0.0	Capsule	Immune modulation	98.22	100.00	WP_011227426
FLPLINNB_14	14601	15362	srtA	0.0	Sortase A	Exoenzyme	97.77	100.00	-
FLPLINNB_10	12122	12853	STER_RS05315	0.0	Capsule	Immune modulation	97.54	100.00	WP_011681176
FLPLINNB_10	12122	12853	STU_RS14645	0.0	Capsule	Immune modulation	97.54	100.00	WP_011226048
FLPLINNB_10	12122	12853	STR_RS05260	0.0	Capsule	Immune modulation	97.40	100.00	WP_011227248
FLPLINNB_1	169468	170319	rfbD	0.0	Capsule	Immune modulation	97.30	100.00	WP_014621820
FLPLINNB_10	12854	14314	STU_RS14650	0.0	Capsule	Immune modulation	97.26	100.21	WP_011226049
FLPLINNB_10	10671	11411	STU_RS14635	0.0	Capsule	Immune modulation	97.17	100.00	WP_011226046
FLPLINNB_10	8022	9018	STU_RS14625*	0.0	Capsule	Immune modulation	96.89	100.00	-
FLPLINNB_10	10671	11411	STER_RS05305	0.0	Capsule	Immune modulation	96.76	100.00	WP_011681174
FLPLINNB_10	9251	10614	STER_RS05300	0.0	Capsule	Immune modulation	96.63	99.71	WP_011681173
FLPLINNB_10	12854	14314	STR_RS05265	0.0	Capsule	Immune modulation	96.44	100.21	WP_041827043
FLPLINNB_10	10676	11411	STR_RS05250	0.0	Capsule	Immune modulation	95.79	98.13	WP_011227246
FLPLINNB_10	9247	10614	STU_RS14630	0.0	Capsule	Immune modulation	94.44	100.00	WP_011226045
FLPLINNB_10	11421	12113	STER_RS05310	0.0	Capsule	Immune modulation	89.61	100.00	WP_011681175
FLPLINNB_2	72987	74290	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
FLPLINNB_22	79	1089	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
FLPLINNB_1	161280	162086	SGO_RS05020	0.0	Capsule	Immune modulation	82.90	100.00	WP_012000440
FLPLINNB_9	59429	60712	tig/ropA	0.0	Trigger factor	Stress survival	80.73	99.77	WP_000107753
FLPLINNB_5	86279	87325	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423
FLPLINNB_1	160543	161280	SGO_RS05025	0.0	Capsule	Immune modulation	84.96	60.29	WP_012000441
FLPLINNB_10	7242	7564	STU_RS14615	3.36e-123	Capsule	Immune modulation	91.64	66.46	WP_011226041

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
FLPLINNB_14	18049	19032	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
FLPLINNB_13	15167	14094	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
FLPLINNB_2	156587	155619	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
FLPLINNB_1	325789	328092	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.97	99.22	AAK74619
FLPLINNB_1	60518	61999	SPD_0310	0.0	UPF0371 protein SPD_0310	92.51	100.00	ABJ54480
FLPLINNB_16	13862	16108	metE	0.0	methionine biosynthesis enzymes	91.99	100.00	AAK74738
FLPLINNB_20	20277	21275	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
FLPLINNB_23	15342	14371	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
FLPLINNB_1	211781	210630	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
FLPLINNB_1	183388	181400	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
FLPLINNB_14	1851	121	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	88.04	100.00	AAK34199
FLPLINNB_6	27647	29125	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.63	100.00	ADE32434
FLPLINNB_2	74290	72989	Eno	0.0	enolase	86.21	99.77	ABP90468
FLPLINNB_6	42837	44729	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
FLPLINNB_16	19032	17323	PGM	0.0	phosphoglucomutase	84.06	99.65	ACH87041
FLPLINNB_8	22699	23709	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
FLPLINNB_4	36507	35146	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
FLPLINNB_8	73045	71153	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
FLPLINNB_2	88729	87839	bglB	1.21e-179	putative phospho--glucosidase	88.89	99.66	AAK33487
FLPLINNB_11	40801	41739	SP_0676	6.59e-169	transcription facot	81.15	97.20	AAK74821
FLPLINNB_16	16300	17157	metF	3.15e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
FLPLINNB_10	51137	50433	covR	1.28e-132	responder protein	85.53	100.00	AAK71319
FLPLINNB_1	28366	27695	rr01	6.56e-125	response regulator	83.93	99.56	CAB54566
FLPLINNB_10	51137	50433	walR	5.41e-123	DNA-binding response regulator	82.13	100.00	ANC99504
FLPLINNB_16	22986	23654	CiaR	4.18e-119	two-component response regulator	84.31	99.55	AAK74935
FLPLINNB_7	73561	74247	CovR	4.50e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
FLPLINNB_16	22986	23657	ciaR	4.11e-117	two component system response regulator	82.14	99.12	AIK75708
FLPLINNB_20	21551	21925	SpxA2	1.37e-71	transcriptional regulator	91.20	94.70	ERL21461
FLPLINNB_4	47870	48271	SpxA1	2.36e-67	transcriptional regulator	80.60	100.00	ERL19273
FLPLINNB_15	25574	25287	spr0479	2.99e-49	essential gene	86.46	98.97	AAK99283
FLPLINNB_3	37494	37240	spr1327	2.36e-45	essential gene	95.29	100.00	AAL00131
FLPLINNB_6	76462	76199	spr0175	3.48e-42	pathogenitcity related	84.09	100.00	AAK98979
FLPLINNB_6	75635	75369	spr0177	7.60e-34	essential gene	84.27	88.12	AAK98981
FLPLINNB_9	59271	58771	RopE (M5005_Spy_1611)	1.66e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
FLPLINNB_1	325789	328086	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.94	98.08	MYN69560
FLPLINNB_8	58584	57565	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451