Genome ID:GCA_041014725.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 8 | 10 | 4 | 13.42 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCNMDKLP_1 | 1673131 | 1673448 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| MCNMDKLP_1 | 1672793 | 1673131 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| MCNMDKLP_1 | 1051883 | 1054453 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| MCNMDKLP_1 | 265419 | 266852 | lmrB | ARO:3002813 | lmrB | 98.95 | 100.00 | JYFL01000006.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MCNMDKLP_1 | 252628 | 253448 | mph(K) | Spiramycin, Telithromycin | 97.32 | 89.14 | NC_000964 |
| MCNMDKLP_1 | 2959563 | 2960080 | aadK | Streptomycin | 98.64864864864865 | 60.58 | M26879 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCNMDKLP_1 | 684459 | 686099 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.62 | 100.00 | WP_003234144.1 |
| MCNMDKLP_1 | 705694 | 707334 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.62 | 100.00 | WP_003234144.1 |
| MCNMDKLP_1 | 4672162 | 4672680 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| MCNMDKLP_1 | 2959565 | 2960080 | aadK | aminoglycoside 6-adenylyltransferase AadK | PARTIALX | 97.09 | 60.56 | WP_003229862.1 |
| MCNMDKLP_1 | 2967681 | 2968196 | aadK | aminoglycoside 6-adenylyltransferase AadK | PARTIALX | 97.09 | 60.56 | WP_003229862.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| MCNMDKLP_1 | 3646972 | 3647910 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| MCNMDKLP_1 | 4120467 | 4121648 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| MCNMDKLP_1 | 4118842 | 4119984 | capA | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391469 |
| MCNMDKLP_1 | 4120003 | 4120452 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| MCNMDKLP_1 | 3650797 | 3651582 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| MCNMDKLP_1 | 2309392 | 2311155 | dep/capD | 0.0 | Capsule | Immune modulation | 99.09 | 100.00 | NP_389723 |
| MCNMDKLP_1 | 3639816 | 3646952 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.78 | 100.00 | NP_391076 |
| MCNMDKLP_1 | 3649575 | 3650771 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| MCNMDKLP_1 | 2474805 | 2475446 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.82 | 100.00 | NP_390062 |
| MCNMDKLP_1 | 3647938 | 3649557 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.78 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MCNMDKLP_1 | 138326 | 139462 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| MCNMDKLP_1 | 18651 | 19520 | pdxS | 6.11e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| MCNMDKLP_1 | 2062613 | 2063389 | CodY | 3.81e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| MCNMDKLP_1 | 3978020 | 3978589 | ClpP | 2.83e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |