Genome ID:GCA_041199455.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 10 | 10 | 9 | 16.76 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJJLHDMD_86 | 62392 | 62709 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| BJJLHDMD_86 | 62054 | 62392 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| BJJLHDMD_92 | 59499 | 62069 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.53 | 100.00 | AL009126.3 |
| BJJLHDMD_59 | 35292 | 36731 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.42 | JYFL01000006.1 |
| BJJLHDMD_21 | 24063 | 24917 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| BJJLHDMD_59 | 22477 | 23397 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
| BJJLHDMD_21 | 6966 | 8168 | blt | ARO:3003006 | blt | 98.00 | 100.00 | L32599.1 |
| BJJLHDMD_161 | 5743 | 7389 | vmlR | ARO:3004476 | vmlR | 98.36 | 100.18 | NC_000964.3 |
| BJJLHDMD_50 | 992 | 1585 | tmrB | ARO:3003059 | tmrB | 99.49 | 100.00 | AL009126.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BJJLHDMD_21 | 24063 | 24917 | aadK | Streptomycin | 98.83 | 100.00 | M26879 |
| BJJLHDMD_59 | 22477 | 23397 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJJLHDMD_59 | 22477 | 23385 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| BJJLHDMD_21 | 24066 | 24917 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| BJJLHDMD_161 | 5746 | 7389 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.36 | 100.00 | WP_003234144.1 |
| BJJLHDMD_110 | 51061 | 51579 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.75 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BJJLHDMD_141 | 22052 | 23233 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| BJJLHDMD_70 | 112875 | 113660 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| BJJLHDMD_141 | 23716 | 24858 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| BJJLHDMD_70 | 101883 | 109019 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.30 | 100.00 | NP_391076 |
| BJJLHDMD_127 | 1515 | 3278 | dep/capD | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_389723 |
| BJJLHDMD_70 | 111653 | 112849 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| BJJLHDMD_70 | 109039 | 109977 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 100.00 | NP_391077 |
| BJJLHDMD_99 | 2876 | 3517 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| BJJLHDMD_141 | 23248 | 23697 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| BJJLHDMD_70 | 110005 | 111624 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BJJLHDMD_44 | 28124 | 26988 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| BJJLHDMD_104 | 11309 | 10440 | pdxS | 1.89e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| BJJLHDMD_98 | 7728 | 8504 | CodY | 8.21e-126 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| BJJLHDMD_69 | 17493 | 16924 | ClpP | 1.24e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| BJJLHDMD_95 | 23404 | 23796 | spxA1 | 4.13e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| BJJLHDMD_95 | 23404 | 23796 | spx | 2.46e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| BJJLHDMD_149 | 34715 | 34473 | SpoVG | 7.51e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| BJJLHDMD_24 | 9856 | 9659 | CspA | 1.02e-32 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| BJJLHDMD_46 | 132730 | 132536 | CspD | 8.69e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| BJJLHDMD_62 | 31277 | 31083 | CspB | 4.06e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |