Genome ID:GCA_041510825.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 28 | 29 | 40.31 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AHHMEPMJ_1 | 1117365 | 1118234 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| AHHMEPMJ_1 | 1116772 | 1117365 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| AHHMEPMJ_1 | 1339227 | 1339943 | STER_RS07085 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681442 |
| AHHMEPMJ_1 | 1339944 | 1340912 | STER_RS07090 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681443 |
| AHHMEPMJ_1 | 1332174 | 1333874 | STER_RS07050 | 0.0 | Capsule | Immune modulation | 99.94 | 100.00 | WP_041827753 |
| AHHMEPMJ_1 | 1336838 | 1337986 | STER_RS07070 | 0.0 | Capsule | Immune modulation | 99.91 | 100.00 | WP_011681439 |
| AHHMEPMJ_1 | 1330427 | 1332172 | STER_RS07045 | 0.0 | Capsule | Immune modulation | 99.89 | 100.00 | WP_011681434 |
| AHHMEPMJ_1 | 1335900 | 1336841 | STER_RS07065 | 0.0 | Capsule | Immune modulation | 99.89 | 100.00 | WP_011681438 |
| AHHMEPMJ_1 | 1338105 | 1338881 | STER_RS07075 | 0.0 | Capsule | Immune modulation | 99.87 | 100.00 | WP_011681440 |
| AHHMEPMJ_1 | 1333892 | 1335094 | STER_RS07055 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011681436 |
| AHHMEPMJ_1 | 1116772 | 1117365 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| AHHMEPMJ_1 | 1332174 | 1333874 | STR_RS06890 | 0.0 | Capsule | Immune modulation | 99.77 | 100.00 | WP_041827077 |
| AHHMEPMJ_1 | 1116772 | 1117365 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| AHHMEPMJ_1 | 876766 | 878424 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| AHHMEPMJ_1 | 1333892 | 1335094 | STR_RS06895 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011227428 |
| AHHMEPMJ_1 | 43637 | 44476 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| AHHMEPMJ_1 | 1335094 | 1335900 | STER_RS07060 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011681437 |
| AHHMEPMJ_1 | 1340930 | 1341907 | STER_RS07095 | 0.0 | Capsule | Immune modulation | 99.39 | 100.00 | WP_011681444 |
| AHHMEPMJ_1 | 1335900 | 1336841 | STR_RS06905 | 0.0 | Capsule | Immune modulation | 99.36 | 100.00 | WP_011227430 |
| AHHMEPMJ_1 | 1336838 | 1337986 | STR_RS06910 | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | WP_011227431 |
| AHHMEPMJ_1 | 1153563 | 1154324 | srtA | 0.0 | Sortase A | Exoenzyme | 99.08 | 100.00 | - |
| AHHMEPMJ_1 | 1335094 | 1335900 | STR_RS06900 | 0.0 | Capsule | Immune modulation | 99.01 | 100.00 | WP_011227429 |
| AHHMEPMJ_1 | 989898 | 990629 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.91 | 100.00 | WP_011681176 |
| AHHMEPMJ_1 | 1341904 | 1343162 | STER_RS07100 | 0.0 | Capsule | Immune modulation | 98.81 | 99.92 | WP_011681445 |
| AHHMEPMJ_1 | 989898 | 990629 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011226048 |
| AHHMEPMJ_1 | 989898 | 990629 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.50 | 100.00 | WP_011227248 |
| AHHMEPMJ_1 | 979861 | 981276 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.31 | 100.00 | WP_011681165 |
| AHHMEPMJ_1 | 1060438 | 1061226 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.23 | 99.75 | - |
| AHHMEPMJ_1 | 1330427 | 1332172 | STR_RS06885 | 0.0 | Capsule | Immune modulation | 98.22 | 100.00 | WP_011227426 |
| AHHMEPMJ_1 | 990630 | 992090 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.95 | 100.00 | WP_011681177 |
| AHHMEPMJ_1 | 989197 | 989889 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 97.69 | 100.00 | WP_011227247 |
| AHHMEPMJ_1 | 989197 | 989889 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 97.69 | 100.00 | WP_011226047 |
| AHHMEPMJ_1 | 988449 | 989187 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 97.56 | 99.73 | WP_011681174 |
| AHHMEPMJ_1 | 1344700 | 1345551 | rfbD | 0.0 | Capsule | Immune modulation | 97.42 | 100.00 | WP_014621820 |
| AHHMEPMJ_1 | 990630 | 992090 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.06 | 100.21 | WP_011226049 |
| AHHMEPMJ_1 | 988449 | 989187 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 96.89 | 99.73 | WP_011226046 |
| AHHMEPMJ_1 | 988452 | 989187 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 96.74 | 98.13 | WP_011227246 |
| AHHMEPMJ_1 | 990630 | 992090 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.10 | 100.21 | WP_041827043 |
| AHHMEPMJ_1 | 987022 | 988389 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 94.96 | 100.00 | WP_011226045 |
| AHHMEPMJ_1 | 987024 | 988389 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.36 | 99.85 | WP_011681173 |
| AHHMEPMJ_1 | 989197 | 989889 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.90 | 100.00 | WP_011681175 |
| AHHMEPMJ_1 | 612132 | 613435 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.18 | 99.46 | WP_000022832 |
| AHHMEPMJ_1 | 1636323 | 1637333 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.54 | 99.41 | WP_002986042 |
| AHHMEPMJ_1 | 1335094 | 1335900 | SGO_RS05020 | 0.0 | Capsule | Immune modulation | 83.27 | 100.00 | WP_012000440 |
| AHHMEPMJ_1 | 157603 | 158886 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| AHHMEPMJ_1 | 1115297 | 1116343 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
| AHHMEPMJ_1 | 1334357 | 1335094 | SGO_RS05025 | 0.0 | Capsule | Immune modulation | 84.96 | 60.29 | WP_012000441 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AHHMEPMJ_1 | 720842 | 721915 | MntE | 0.0 | manganese homeostasis | 94.97 | 99.72 | ABF32167 |
| AHHMEPMJ_1 | 1157011 | 1157994 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| AHHMEPMJ_1 | 527092 | 528060 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| AHHMEPMJ_1 | 1510321 | 1512624 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| AHHMEPMJ_1 | 1229021 | 1230502 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.31 | 100.00 | ABJ54480 |
| AHHMEPMJ_1 | 754153 | 756399 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| AHHMEPMJ_1 | 72084 | 73082 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| AHHMEPMJ_1 | 27154 | 28125 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| AHHMEPMJ_1 | 1395305 | 1394154 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| AHHMEPMJ_1 | 1358588 | 1356600 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.84 | 100.00 | AE014259_2 |
| AHHMEPMJ_1 | 1140808 | 1139078 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| AHHMEPMJ_1 | 1825469 | 1823991 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| AHHMEPMJ_1 | 612132 | 613433 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| AHHMEPMJ_1 | 1810281 | 1808389 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| AHHMEPMJ_1 | 759324 | 757615 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| AHHMEPMJ_1 | 1679716 | 1680726 | pdh | 0.0 | pyruvate dehydrogenase | 82.79 | 99.70 | ABP91006 |
| AHHMEPMJ_1 | 907439 | 906078 | mnmE | 0.0 | central tRNA-modifying GTPase | 81.80 | 99.56 | ABP90420 |
| AHHMEPMJ_1 | 1730075 | 1728183 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| AHHMEPMJ_1 | 597697 | 598587 | bglB | 1.32e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| AHHMEPMJ_1 | 818713 | 817775 | SP_0676 | 2.33e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| AHHMEPMJ_1 | 756591 | 757448 | metF | 2.53e-164 | methionine biosynthesis enzymes | 86.01 | 99.31 | AAK74739 |
| AHHMEPMJ_1 | 1028923 | 1028219 | covR | 4.34e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| AHHMEPMJ_1 | 1200927 | 1200256 | rr01 | 4.14e-125 | response regulator | 84.38 | 99.56 | CAB54566 |
| AHHMEPMJ_1 | 1028923 | 1028219 | walR | 1.83e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| AHHMEPMJ_1 | 316767 | 317453 | CovR | 9.97e-118 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| AHHMEPMJ_1 | 763277 | 763945 | CiaR | 2.00e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| AHHMEPMJ_1 | 763277 | 763948 | ciaR | 1.97e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| AHHMEPMJ_1 | 73358 | 73732 | SpxA2 | 5.28e-69 | transcriptional regulator | 90.40 | 94.70 | ERL21461 |
| AHHMEPMJ_1 | 918798 | 919199 | SpxA1 | 3.73e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| AHHMEPMJ_1 | 159044 | 159544 | RopE (M5005_Spy_1611) | 4.88e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| AHHMEPMJ_1 | 1510321 | 1512618 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| AHHMEPMJ_1 | 1715601 | 1714582 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |